Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2686 ATGGAACCTCGTGTTGGTAATAAGTTTCGCCTCGGCCGGAAGATCGGTAGCGGTTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAGACTAATGAGGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTGTATGAGTCCAAGCTATACAGAATTCTACAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAAGGGGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTATCATTAAAGACAGTTCTCATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCTAAATCATTTCTACATCGAGATATTAAACCAGATAATTTTCTGATGGGCTTAGGAAGGCGTGCAAACCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAACAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGCCGAAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGGGGAAGTCTTCCTTGGCAGGGACTAAAAGCTGGAACCAAGAAACAGAAGTATGAGAAAATCAGCGAGAAAAAGGTTTCTACTACGATTGAAGTCTTGTGTCGAGGCTATCCAACAGAATTTGCATCATACTTCCACTATTGCCGCTCATTAAGGTTTGATGATAAGCCAGACTATGCTTACCTCAAAAGGATATTTCGCGACCTGTTTATCCGTGAAGGATTCCAATTTGATTATGTATTTGACTGGACCATCTTGAAGTATCAGCAATCACAGCTAGCCACTCCTCCAGCACGGGCCGTTGGTCCTACTGCTGGAACCAGTTCCGGAATGCCGCCGGCTGTTACCAATGCTGAAAGACCAACAGGAGGGGAAGAAGGGCGGCCTCCTGGTTTGGTTTCAGTGGATTCATCTAGGCGAAGAATGTCAGGGCCCATTTTAAATTCCTTATCAACCGCCAATATCTTGGGCCAGTCCAGTGGATCATCAAGGCGGGTTGCTGTTTCTAGTAGCCGCGATGCATTTGTTGGTGCAGAGTCAGATGTCCGTGCACGTACAGCCGAGGCTAGCCCTGGAACAGCTCACAGAATTACGGGTGGGCAAAGAAGTTCACCAGTTGGATCCTCTGACCCCAAGAGAGTAGTAGTACCATCTGGAGAATATGCTGCCCATGCCAAGAATTACGACAGCGCTGTCAGAGGCATGGAGTCACTGCAGTTAGAGAATGATGAGAGGGCCCATATTAGTTCTCGCTTCTCTCATCTACTGAATTTGTGA 1398 0.4442 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTTIEVLCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAVGPTAGTSSGMPPAVTNAERPTGGEEGRPPGLVSVDSSRRRMSGPILNSLSTANILGQSSGSSRRVAVSSSRDAFVGAESDVRARTAEASPGTAHRITGGQRSSPVGSSDPKRVVVPSGEYAAHAKNYDSAVRGMESLQLENDERAHISSRFSHLLNL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2686 465 PANTHER CASEIN KINASE I-LIKE 356 421 - -
Aev01g2686 465 PANTHER CASEIN KINASE I-LIKE 1 311 - -
Aev01g2686 465 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2686 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aev01g2686 465 PANTHER CASEIN KINASE-RELATED 356 421 - -
Aev01g2686 465 PANTHER CASEIN KINASE-RELATED 1 311 - -
Aev01g2686 465 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Aev01g2686 465 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aev01g2686 465 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2686 465 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2686 465 MobiDBLite consensus disorder prediction 304 345 - -
Aev01g2686 465 Gene3D Transferase(Phosphotransferase) domain 1 1 311 - -
Aev01g2686 465 MobiDBLite consensus disorder prediction 389 421 - -
Aev01g2686 465 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2686 Aev-Chr1 29747864 29751637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2686 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.34e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aev01g2686 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2686 K02218 - gmx:100785851 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2686 01 29747864 29751637 Aev01g2686 01 29747864 29751637 ECH
Aev01g2686 01 29747864 29751637 Aev04g1393 04 9768351 9772351 PCT