Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2684 ATGGTGGTTGCTCAAGGTGGCGGTTGCGGTGAAAGCGGTGGCGGTGGCGGTGGCTGTTCTTTCTCTGCCTCACTGCTGATCAATAAAACTGCGATGATGGAACAACTAGAAGAAGAAGATGATGAAGACATAGTGGCGGCCAAGAGAGTGAAAACAGAGCAAGTCACGTGTTCCTGTCATCAAGACGACGACGTTTTCAGCGACGAGTCCGAGAGAAAGAACGATTCCGGAGTGACGGAAGAAGACTGTGCCATGGAAGCAGCTGTTCGCGTGAAACAAGAGGTTCTTGATGACGCCGCCGTTAACGGCGGTTCGTCCTCTTCGTCTTCGATCGAGTTGCCTAAACCCATGGAAGGGCTGCACGAATCGGGTCCGCCACCGTTCCTCAAGAAGACATTCGAAATGGTTGAGGATCCGGAAACCGACCCGATTGTCTCGTGGAGCGAGACACGTGACAGCTTCATCGTTTGGGATTCTCACGAATTCTCCAAAATTCTTCTCCCAAAATACTTCAAGCACAGTAATTTCTCGAGCTTCATTCGCCAGCTCAACACCTATGGGTTTAGGAAGGTTGATTCAGATCGATGGGAGTTTGCAAATGAAGGATTCCAAGGAGGGAAGAAGCACTTGCTGAAGAACATAAGGAGGAGGAGCAAGTACAACAAACTGCATCATGGAGCATTCAATTGTTCGATGAAGCCTGGCCTTGAGGCTGAAGTTGAGAAGCTGAAGAAGGATCAGAGCATACTCAAATTGGAAATTCTGAAGCTGAGACAGCAACAGGAAAGTTCCCATGTTCAGCTCACAAGTGTTCAGGAGCGGATTCGGTGTGCCGAAATGAAGCAGTATCAGATGATATTCTTCCTCACAAGAATGGCCAGAAGACCAACCTTTGTGGAACACTTACTCCACAGGGCCAAGAGGAAAAGAGAGCTTGATGGCCCTGACATGCTTAACAGGCGAAGATTGCTCGGAGCTCACTGCCCTGTCACCTTCCCTAAGGCCATGGAACCAACTCCGAATGTCGAATTCGCCACGCTGCAATCTGAGCTCAATGGACTATATTCTGAAACTGTGAATACCAGTAAGGATATGGAGCAGCACCCTACTCCACTGGAAGATGAGTTATGCAGCACTGTGCAAGGCTTAAGGGCCTCCTCTTCAAGAACCAGTGATGTATCCTCTGCCTATCATGTTATGTCAGAGAAGCTACTAGGGGAAAATTCTCTTGCTGATGAAGAGCTTGATGTCAATGACTCAAATATTTACCTTGAGTTGGAGGATTTGATAACTAAACCAACTGATTGGGTTGGATCTGCATCTGCAAGTGGCTTGGTGGGGCAAACTACTTGA 1353 0.4826 MVVAQGGGCGESGGGGGGCSFSASLLINKTAMMEQLEEEDDEDIVAAKRVKTEQVTCSCHQDDDVFSDESERKNDSGVTEEDCAMEAAVRVKQEVLDDAAVNGGSSSSSSIELPKPMEGLHESGPPPFLKKTFEMVEDPETDPIVSWSETRDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHHGAFNCSMKPGLEAEVEKLKKDQSILKLEILKLRQQQESSHVQLTSVQERIRCAEMKQYQMIFFLTRMARRPTFVEHLLHRAKRKRELDGPDMLNRRRLLGAHCPVTFPKAMEPTPNVEFATLQSELNGLYSETVNTSKDMEQHPTPLEDELCSTVQGLRASSSRTSDVSSAYHVMSEKLLGENSLADEELDVNDSNIYLELEDLITKPTDWVGSASASGLVGQTT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2684 450 Coils Coil 240 260 - -
Aev01g2684 450 Pfam HSF-type DNA-binding 128 217 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 PRINTS Heat shock factor (HSF) domain signature 166 178 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 PRINTS Heat shock factor (HSF) domain signature 179 191 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 PRINTS Heat shock factor (HSF) domain signature 128 151 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 MobiDBLite consensus disorder prediction 61 80 - -
Aev01g2684 450 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 105 433 - -
Aev01g2684 450 MobiDBLite consensus disorder prediction 100 120 - -
Aev01g2684 450 SUPERFAMILY "Winged helix" DNA-binding domain 123 217 IPR036390 -
Aev01g2684 450 ProSitePatterns HSF-type DNA-binding domain signature. 167 191 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 Gene3D - 120 218 IPR036388 -
Aev01g2684 450 SMART hsfneu3 124 217 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev01g2684 450 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 105 433 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2684 Aev-Chr1 29735191 29736707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2684 114 406 HSF AT2G26150 44.147 3.72e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev01g2684 HSF_DNA-bind 1.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2684 K09419 - gmx:100818430 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2684 01 29735191 29736707 Aev01g2684 01 29735191 29736707 ECH