Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2680 ATGATCTTAATTACTGATGAAACTGGTATCTATGCGTCAAGCTCATCATCATCTTCTTCTTTGGGGAGTAACAGTGCAGCAGCAGCAGCTCAAAGTCTTTTTAACTTGTATCAGCGTCTAATATTTGATGTAAATAATAATGATGATGAGTGCAGGTGTGTTCCTGGAATTGCTTTCAAGAACCATATGCCCTACCTAGACCTGCAACAATCGGATCTTCTAGCACTCGCATCCCCAGGAATACAAACTCAATTCTATCAGGAAGCAAGGATTGAGAGAGCTATTTTCATGGGGTGCAAGAAAGGGGAAATTGAGCTTGGATTCTCCGCCATGCATCAAATTGACATTGAAGGCGCACTTAGGACTCTATTCCCTGAAGATTTTTGCAGACTCTCCCAGCAACAATTGCCAATTCATCATCATCATCAACAACAACAACAGAATGATATTAACAATAATAATAATAGACTAGTAGTAGTAGCACCTTCATCATCAAATAATAATAATTCATCTTGTTTGAGAACACTATCCACCACCTCCACCCCCACCCCCACCCCGGGGGGTAGCCTAAGCCCCTTAATCATCTTCCCTGCTACTACTACTACTTCTAATGTTCATCATCACATTATTCCACCACCCACTTCTTCTTCTTCTTCCCTTGTTCCTAATAATGTGGCCCCCACAATAATACCACCAATGCAAACAGCAACAACATTAGCATCACCTCAATTCATTCCAACACCAGAGGCTGAACAAGAGGCAATCATAAAAGCTTTCCTTCATGTTATATCTTCACCTCCTTCAACTAATTCCCATCATCAAAATTTGTCGAATTATCATAATAATCCAGAAGCTAGTAGTAGTGCTTTCAAGATGTACTACGACTCTAGGCCACGCCATTTGGGGTCCAGTAGTAATATTAACTCCTCATCATCATCACGTAGTAGACAAAGCTTAGTGAAGAGATCAATTGCATTCTCAAGAAAGTTGCATCTGATGATGATGAGAATGAGGGAACGGTCTCAGTTCCAATTCCAAGCAGTTCGACAGAGTGCCACTTCACAGCTACATCATACCATATCAGAGAGAACAAGGCGTGACAAACTCAATCAGAGGTTTCAGGCACTCAGGCCACTTCTTCCTCCATCAACTAAGAATGTGAAAGCTGCAATCCTTATAGCAGCAAAGGAGACATTGAAATCATTGATGGCAGAACTTGAAAAGCTAAAGATGAGGAACCAGCAATTGACAACACTACTTATGTCCTCCTCATCTTCATTATCAAAGGATGAGAGATTGAATGTTCGAGTGTTACAAGTGCCGGGACCGAGCTCATCAGAGGAGAGAATGGTGGAGTTGCAAGTGATTGTGAGATCAGAACGAAATGAAGCTGATATAGTGATTCGCTTATTGGAGTTCTTGAAGCGGGTTCACAACGTCAGATTGATTTCCATGGATGCAAACACCCACATTACTATTCAACAAACCACACCCATTCATCAATTCAACTTCAGACTAAGGCTTCTTCAGGGAAGTGAATGGGACGAGTCTGCCTTCGAGGAAGCAGTGAGAAGAGTGGTTGCAGATTATTATTTACCTAATACATTGAATTGA 1614 0.4139 MILITDETGIYASSSSSSSSLGSNSAAAAAQSLFNLYQRLIFDVNNNDDECRCVPGIAFKNHMPYLDLQQSDLLALASPGIQTQFYQEARIERAIFMGCKKGEIELGFSAMHQIDIEGALRTLFPEDFCRLSQQQLPIHHHHQQQQQNDINNNNNRLVVVAPSSSNNNNSSCLRTLSTTSTPTPTPGGSLSPLIIFPATTTTSNVHHHIIPPPTSSSSSLVPNNVAPTIIPPMQTATTLASPQFIPTPEAEQEAIIKAFLHVISSPPSTNSHHQNLSNYHNNPEASSSAFKMYYDSRPRHLGSSSNINSSSSSRSRQSLVKRSIAFSRKLHLMMMRMRERSQFQFQAVRQSATSQLHHTISERTRRDKLNQRFQALRPLLPPSTKNVKAAILIAAKETLKSLMAELEKLKMRNQQLTTLLMSSSSSLSKDERLNVRVLQVPGPSSSEERMVELQVIVRSERNEADIVIRLLEFLKRVHNVRLISMDANTHITIQQTTPIHQFNFRLRLLQGSEWDESAFEEAVRRVVADYYLPNTLN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2680 537 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 20 530 IPR044658 -
Aev01g2680 537 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 419 IPR036638 GO:0046983
Aev01g2680 537 CDD bHLH_AtbHLH_like 358 409 IPR045239 -
Aev01g2680 537 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 20 530 - -
Aev01g2680 537 Coils Coil 392 419 - -
Aev01g2680 537 Gene3D - 351 426 IPR036638 GO:0046983
Aev01g2680 537 MobiDBLite consensus disorder prediction 301 320 - -
Aev01g2680 537 Pfam Helix-loop-helix DNA-binding domain 357 402 IPR011598 GO:0046983
Aev01g2680 537 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 353 402 IPR011598 GO:0046983
Aev01g2680 537 SMART finulus 359 408 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2680 Aev-Chr1 29715280 29718308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2680 30 529 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 33.710 3.00e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2680 HLH 4.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2680 - - gmx:100798452 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2680 01 29715280 29718308 Aev01g2680 01 29715280 29718308 ECH
Aev01g2680 01 29715280 29718308 Aev04g1380 04 9650960 9656611 PCT