Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2669 ATGGTACCAGCAACTACTACTTCTCATTCTCCCAATATAGTATTATTATGTGTGAATCTTAATGAAGATCATCAAAAGCATGATGATGATGATGATCACGATGACCCCAGCAGCTTCTTCTTCACTCAAAACCATCAACTAGTCTCTTCATTTTCGTCTCTCTCACATGATCCCCCGGACCAGGATCAGGATCAGGATCAACAACAACCATCTCCCTACTACTTGGGCGAACAACCACCAAAGCACTTATTACCAACTGCTCATCATGAAAAGGGTGAGAAGTTTATTGCTTCTTCTTCTAGTGGGCATGGATCATCTAGGGATGATCATTCAGCAGGTGATCATCATCATCAGGATGGTTCTTCATCTTCATCTTCAGTGAAGTGGTTGCCTTCAAAGAAGAGAATATTGATCCGGAATATGATGACCATGGAGGAGGATCAAAAGGCGGGTTCGGGTTCTTCTCATGTAGTAGCAGAAGGCAGCTCCTCTGTTCACAACAAGAGCTACTATTTTGAAGATCAGCAACAACCAATATTCTCATCATCATCACATCCTCCTCCTCTAATTGCTGCTGCTGCAACAACTCACAACAACACTAATATCACTGTTACTGTTAGGGTTTGCTCTGATTGCCACACCACCAAGACCCCTCTCTGGAGGAGTGGACCAAGCGGCCCCAAGTCACTTTGCAACGCCTGTGGGATACGACAAAGGAAGGCGAGACGTGCGGCCGCCATGGCTGCAGCGGCCGCCAATGGTACGATCATCAATCCGGTGGCAGCAGCGACATCCGTGCCTGTGAAGAAGGGTACGGGAAACAACAACACTAATATTAATAAAAAGTTTGGTAACAAAGACAAGGAGTCCAAAATGGAGTGTAGTGCATCACCACAACATCACTTGAAAAAGAAGCGCAAACTAATTGGAGTCGGAAGCAAGCAATGTCTAGGTGGTGATGGTATAAACAACAAGTTAGGTTTCGAGGATTTGAAATTGATGAGGCTAAGTAATAGTAATAATAATAAAAGTAAGAATTTCCCTCAGGACGAGATCGAGATCAAGGAGGCTGCCATCTTGCTCATGGCTTTGTCTTACGGCCACCTCCTAGTTCATGGATAG 1122 0.4465 MVPATTTSHSPNIVLLCVNLNEDHQKHDDDDDHDDPSSFFFTQNHQLVSSFSSLSHDPPDQDQDQDQQQPSPYYLGEQPPKHLLPTAHHEKGEKFIASSSSGHGSSRDDHSAGDHHHQDGSSSSSSVKWLPSKKRILIRNMMTMEEDQKAGSGSSHVVAEGSSSVHNKSYYFEDQQQPIFSSSSHPPPLIAAAATTHNNTNITVTVRVCSDCHTTKTPLWRSGPSGPKSLCNACGIRQRKARRAAAMAAAAANGTIINPVAAATSVPVKKGTGNNNTNINKKFGNKDKESKMECSASPQHHLKKKRKLIGVGSKQCLGGDGINNKLGFEDLKLMRLSNSNNNKSKNFPQDEIEIKEAAILLMALSYGHLLVHG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2669 373 ProSitePatterns GATA-type zinc finger domain. 209 234 IPR000679 GO:0006355|GO:0043565
Aev01g2669 373 ProSiteProfiles GATA-type zinc finger domain profile. 203 239 IPR000679 GO:0006355|GO:0043565
Aev01g2669 373 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 368 - -
Aev01g2669 373 MobiDBLite consensus disorder prediction 50 129 - -
Aev01g2669 373 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 207 242 - -
Aev01g2669 373 SMART GATA_3 203 256 IPR000679 GO:0006355|GO:0043565
Aev01g2669 373 MobiDBLite consensus disorder prediction 50 74 - -
Aev01g2669 373 MobiDBLite consensus disorder prediction 282 299 - -
Aev01g2669 373 CDD ZnF_GATA 208 240 IPR000679 GO:0006355|GO:0043565
Aev01g2669 373 Pfam GATA zinc finger 209 242 IPR000679 GO:0006355|GO:0043565
Aev01g2669 373 Gene3D - 203 283 IPR013088 GO:0006355|GO:0008270
Aev01g2669 373 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2669 Aev-Chr1 29611864 29613461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2669 174 369 C2C2-Gata Transcription Factor Family AT5G49300 32.143 7.18e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev01g2669 GATA 3.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2669 - - gmx:100810698 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2669 01 29611864 29613461 Aev01g2669 01 29611864 29613461 ECH
Aev01g2669 01 29611864 29613461 Aev04g1360 04 9390042 9394446 PCT