Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2659 ATGATCTCCACCATGGAAGATGATGAGGAGTGCATCACAGGGCTGTGCCTTGGATTGGGAACAGGAGGGAATCACAACAAGAATAATAATAATGTGCCAAAAAAGGAGAAACAGAAAGTGAAGAAGCCATTTGTGGCTAATTCCTTGGACCTACCATTTGAGCTCTGTCCTGATCAAGAAGACCATGATGAATCCTCTGATAACAAGCCTGAAATAATATTCAGTTTGCATCATAGAAACGATGACCACCACCACCCAAATTCAGATGATAGCACCAAAAGCAAGAACGGCATCAGAAAGAAACTCAGGCTCACTAAGGACCAATTGGCCATGCTTGAAAGCAGCTTCAAGCTTCACACCACTCTTAATTCTGCACAGAAGCAAGCACTTGCAGACCAGTTAAATTTAAAGGCTAGACAAATTGAAGTTTGGTTCCAAAACAGAAGAGCAAGGACGAAGCTGAAACAGACGGAGGTGGATTGCGAGTTGTTGAAAAGACGGTGTGAGAGCCTAAGCGATGAGAATAGAAGGCTGAAGAAGGAAGTGCAGGAGCTGCGTGCTCTCAAAGTTGCAAAATCGCCATTATACATTCAACTCTCAAAAGCGGCAACTCTGACTACTACTACTACTACGTGTTCTTCTTGCGACAAGCTAGTAGTAAAGCCTGATCCCACCATTGAATGA 684 0.4357 MISTMEDDEECITGLCLGLGTGGNHNKNNNNVPKKEKQKVKKPFVANSLDLPFELCPDQEDHDESSDNKPEIIFSLHHRNDDHHHPNSDDSTKSKNGIRKKLRLTKDQLAMLESSFKLHTTLNSAQKQALADQLNLKARQIEVWFQNRRARTKLKQTEVDCELLKRRCESLSDENRRLKKEVQELRALKVAKSPLYIQLSKAATLTTTTTTCSSCDKLVVKPDPTIE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2659 227 Gene3D - 81 159 - -
Aev01g2659 227 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Aev01g2659 227 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Aev01g2659 227 SUPERFAMILY Homeodomain-like 80 156 IPR009057 -
Aev01g2659 227 Coils Coil 147 191 - -
Aev01g2659 227 Pfam Homeobox associated leucine zipper 155 188 IPR003106 GO:0006355|GO:0043565
Aev01g2659 227 SMART halz 155 198 IPR003106 GO:0006355|GO:0043565
Aev01g2659 227 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 11 220 - -
Aev01g2659 227 CDD homeodomain 99 156 IPR001356 GO:0003677
Aev01g2659 227 Pfam Homeodomain 99 153 IPR001356 GO:0003677
Aev01g2659 227 MobiDBLite consensus disorder prediction 22 41 - -
Aev01g2659 227 SMART HOX_1 97 159 IPR001356 GO:0003677
Aev01g2659 227 MobiDBLite consensus disorder prediction 78 97 - -
Aev01g2659 227 PANTHER - 11 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2659 Aev-Chr1 29562408 29563413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2659 99 222 Homeobox Transcription Factor Family AT4G16780 64.516 8.03e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev01g2659 Homeodomain 8.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2659 K09338 - lang:109339930 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2659 01 29562408 29563413 Aev04g1357 04 9335573 9336917 PCT