Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2652 ATGGCAGTAGATCTAGAAGGCGCAGGAGTAGTTAAGAAGAAGGTAAGGATGGAGGAACAAATAGCGATACAAGAAGCTGCTTCCGCTGGATTGAAGAGCATGGAGCATCTCATTCGACTCCTTTCATCTTCTTCTTCACAGAACAATCAGCAGCACTACCACCATCATAATAGCGGTCTGGATCTGAACCGTCTTGATTGCACAGAAATAACCGACTTCACGGTATCCAAGTTCAAGCAGGTTATTAACTTGTTGAACCGCACCGGTCACGCACGATTCCGTCGAGCACCTTCTAATACTAATAATATTAATCCTTCTCCTTCTCCTTCTGCTTCTAATTGTTTTTCTGCTCCTCATCAAGTTGATGACAAATTCAACCATGTACAACAACAAGCCGTGCCTCCTCCTCCTCCTCAGGGATTGACTCTGGATTTTGGCAAGCCGGTTCAGGTCAAGTCCTCAAATCATAATCATAATCATAATCCCAAACCCTGCACCGAGTTATCCGTGTCGCAGTCTAAGGAGACGTGCAGCATGTCATCCTCCTTCATGTCCTCCATCACCGGAGACGGCAGCGTCTCCGATGGTAAGATTGGACCCTCCGCTGGAAAACCCCCTCTCTCCTCATCTCACCGCAAAAGATGCCACGATGCCACCCTCTCCGGAAAACTCTCATCCTCCTCTCACTGCCATTGCTCCAAGAGAAGGAAATCCCGTGTGAAGCGAATGATTCGAGTGGCGGCGATAAGCTCGAAGATTGCAGATATCCCAGCGGATGAGTACTCGTGGAGAAAATACGGTCAAAAACCCATCAAGGGCTCACCTTACCCACGTGGGTACTACAAGTGCAGTAGCGTGAGAGGGTGTCCAGCCAGGAAGCACGTGGAGAGAGCACATGACGACCCCAACATGCTCATCGTTACTTACGAGGGAGACCACCGTCACCCCCTTCCATTCACCCCTCATCATCATCCCATCTCAATCTCATCTACGCCTCTCATACCAAACACCTCACTCACTCCCACCCACTCTTGA 1035 0.4937 MAVDLEGAGVVKKKVRMEEQIAIQEAASAGLKSMEHLIRLLSSSSSQNNQQHYHHHNSGLDLNRLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSNTNNINPSPSPSASNCFSAPHQVDDKFNHVQQQAVPPPPPQGLTLDFGKPVQVKSSNHNHNHNPKPCTELSVSQSKETCSMSSSFMSSITGDGSVSDGKIGPSAGKPPLSSSHRKRCHDATLSGKLSSSSHCHCSKRRKSRVKRMIRVAAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAHDDPNMLIVTYEGDHRHPLPFTPHHHPISISSTPLIPNTSLTPTHS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2652 344 MobiDBLite consensus disorder prediction 324 344 - -
Aev01g2652 344 Gene3D WRKY domain 243 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2652 344 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2652 344 MobiDBLite consensus disorder prediction 152 171 - -
Aev01g2652 344 Pfam Plant zinc cluster domain 212 255 IPR018872 -
Aev01g2652 344 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 13 318 - -
Aev01g2652 344 Pfam WRKY DNA -binding domain 259 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2652 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 318 IPR044810 GO:0003700
Aev01g2652 344 MobiDBLite consensus disorder prediction 181 213 - -
Aev01g2652 344 SUPERFAMILY WRKY DNA-binding domain 255 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2652 344 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2652 344 MobiDBLite consensus disorder prediction 316 344 - -
Aev01g2652 344 MobiDBLite consensus disorder prediction 94 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2652 Aev-Chr1 29521700 29522989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2652 16 315 WRKY Transcription Factor Family AT2G24570 51.692 1.56e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev01g2652 WRKY 6.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2652 - - gmx:732589 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0671 05 4671333 4672685 Aev01g2652 01 29521700 29522989 PCT
Aev01g2652 01 29521700 29522989 Aev04g1350 04 9278990 9280222 PCT