Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2639 ATGGAGAATATTGGTGAGTACAGCAATTACTGGGAGACCAACATGTTTCTCCAAACCGAAGAGCTTGACAGCTGGGCATTGGATGAGGCGTTCTCGGGTGGGTACTACGATTCGAGCTCGCCGGATGGGGCGGCTTCATCGGCGGCGTCAAAGAACATAGTCTCCGAGAGGAATAGGAGGAAGAAGCTCAACGATAAGCTTTTTGCTCTTAGGGCAGTGGTCCCCAACATTAGCAAGATGGATAAGGCTTCAATAATAAAGGATGCGATAGAATACATACAGCACTTGCAACAGCAAGAGAAGATAATCGAAGGGGAGATCTTGGAGCTTGAATCTAATAATAATAATAATAATCCACCAATTATTGCTGCTGCTGCTGCGAGTACTAGGTGCTATGATTTGGAACAAGAGCAGCTCCCTGTTTTGCTGAGGTCTAAGAAGAAGAGAACAGAGCATCATCACCACATTCTCATTGATTCTGCAGCTGCTGCCACTTCCAGAAACAACAATAATAATAATAATAATAATAATTCCCACCCAATTGAAGTCATTGAGCTGAGGGTAACATACATGGGGGCGAAGACGTTAGTGGTGAGCCTGACATGCAGCAAAAGGACAGACACAATGGTGAAACTCTGTGAGGTTTTCGAATCTTTAAAGCTAAACATCATCACTGCCACCATCACTTCTTTTCCTGCCACTCTTTGGAAGACAGCTTACATTCAGGGAGATGAGGAAGAGAAAGATATTTTGCAGATAAAAATAGAGACAGCAATTGCAGCACTTAATGATCCTCATAGCCCAATGAGCGTCTGA 816 0.4387 MENIGEYSNYWETNMFLQTEELDSWALDEAFSGGYYDSSSPDGAASSAASKNIVSERNRRKKLNDKLFALRAVVPNISKMDKASIIKDAIEYIQHLQQQEKIIEGEILELESNNNNNNPPIIAAAAASTRCYDLEQEQLPVLLRSKKKRTEHHHHILIDSAAAATSRNNNNNNNNNNSHPIEVIELRVTYMGAKTLVVSLTCSKRTDTMVKLCEVFESLKLNIITATITSFPATLWKTAYIQGDEEEKDILQIKIETAIAALNDPHSPMSV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2639 271 Coils Coil 93 113 - -
Aev01g2639 271 Gene3D - 44 114 IPR036638 GO:0046983
Aev01g2639 271 PANTHER TRANSCRIPTION FACTOR BHLH35 2 265 - -
Aev01g2639 271 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Aev01g2639 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 111 IPR036638 GO:0046983
Aev01g2639 271 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 265 - -
Aev01g2639 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Aev01g2639 271 SMART finulus 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2639 Aev-Chr1 29403367 29406591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2639 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 51.626 1.21e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2639 HLH 5.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2639 - - adu:107496381 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2639 01 29403367 29406591 Aev04g1329 04 8998836 9010201 PCT