Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2607 ATGGAGTGGGATAGCAACTCGGATCTGAGCGGGGACGAAGAGGAAGGGTTCGACCTAAACGACGACGTCGTCGACGATGGAGATTGCCCTCTCCCTTTCCCAGTCGAGAACCTTCTACTCCAAACGGCGCCGTGTGGATTCGTCGTCACCGATGCGCTCGAGCCAGACCACCCTATCATCTACGTCAACACCGTCTTCGAGATCGTCACCGGTTACCGCGCCGAAGATGTTCTCGGTCGCAACTGCCGTTTCTTGCAGTGTCGAGGTCCATTTGCTAAGAGAAGGCATCCGTTAGTGGACTCGACAGTAGTTTCAGAAATTAGAAGATGCCTTGAGGAGGGGATTGAATTCCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCCCCACTGATGAACAGATTGCGTCTGACGCCTATATATGGAGATGATGAGACTATAACACATGTAATTGGAATCCAGTTCTTCACAGAGGCAAACATTGATCTTGGTCCTGTTCAAGGTTCTTCTATTAAGGAATCTGCTAAATCATCTGATCAGTTTCGTTCTGTGCTTTCCTCTTTACATCCTCTTCCGCTGGGGGACCGAAATGTATCTCGTGGAGTTTGTGGGATATTGCAATTGAGTGATGAGGTACTATCTCTCAAGATACTTTCCCGTTTAACTCCAAGAGATATTGCATCAGTTAGCTCTGTAAGTAGGCGATTGTATGAGTTGACACAAAATGAAGACCTTTGGAGAATGGTTTGCCAAAATGCATGGGGCAGTGAGACTACACGTGTTTTAGAGACTGTGCCTGGTGCAAGGAGGCTTGGATGGGGTCGGCTGGCAAGGGAATTGACCACTCTTGAAGCAGCAGCATGGAGAAAGTTGACTGTTGGAGGTGCCGTTGAGCCCTCACGCTGCAACTTTAGTGCTTGTGCAGTTGGAAATAGGGTTGTTCTATTTGGTGGTGAAGGGGTCAACATGCAACCTATGAATGACACCTTTGTATTAGATCTCAATTCTAGTAATCCAGAGTGGCAACACGTCCAGGTAAGCTCTCCTCCTCCTGGTCGTTGGGGCCACACACTTTCTTGTGTTAATGGTTCTCGCTTGGTTGTATTTGGAGGCTGTGGTAGACAAGGCTTGCTCAATGATGTGTTTGTTCTAGACCTGGATGCAAAGCCTCCAACTTGGCGTGAAATTTCTGGATTGGCACCTCCACTTCCAAGGTCTTGGCATAGCTCCTGTACTCTTGATGGTACTAAGTTGATTGTTTCTGGGGGCTGCGCAGACTCTGGGGTGCTCTTGAGTGACACTTTCCTCCTTGATTTGTCTATGGAAAAGCCAGTCTGGAGAGAGATACCAGTGGCATGGACCCCGCCTTCTCGTCTGGGGCACACATTGTCTGTTTATGGTGGTAGGAAAATACTGATGTTTGGGGGTCTAGCAAAGAGTGGGCCCTTGCGTTTTCGTTCCAGTGATGTATTCACGATGGATTTAAGCGAGGATGAACCTTGCTGGAGATGTGTGACAGGGAGTGGAATGCCTGGTGCTGGAAATCCTGGGGGCATAGCTCCTCCTCCAAGACTTGATCACGTGGCTGTCAGTCTTCCAGGTGGGAGAATTCTGATATTTGGTGGGTCTGTTGCAGGTCTTCACTCTGCATCTCAGCTTTACATTCTTGATCCGACCGACGAGAAGCCCACATGGAGAATTCTAAATGTACCTGGGCGCCCTCCGAGATTTGCTTGGGGACACAGTACATGTGTTGTTGGAGGGACAAGAGCTATTGTATTGGGTGGTCAAACTGGGGAAGAATGGATGCTAAGTGAGCTCCATGAACTTTCTCTTGCAAGCTCTGCAATATAG 1854 0.4865 MEWDSNSDLSGDEEEGFDLNDDVVDDGDCPLPFPVENLLLQTAPCGFVVTDALEPDHPIIYVNTVFEIVTGYRAEDVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRRCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANIDLGPVQGSSIKESAKSSDQFRSVLSSLHPLPLGDRNVSRGVCGILQLSDEVLSLKILSRLTPRDIASVSSVSRRLYELTQNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSSPPPGRWGHTLSCVNGSRLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEDEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSAI* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2607 617 Pfam F-box-like 213 251 IPR001810 GO:0005515
Aev01g2607 617 Pfam Kelch motif 458 509 IPR011498 GO:0005515
Aev01g2607 617 Pfam Kelch motif 525 572 IPR011498 GO:0005515
Aev01g2607 617 Gene3D - 201 249 - -
Aev01g2607 617 SUPERFAMILY Galactose oxidase, central domain 288 602 IPR011043 -
Aev01g2607 617 SUPERFAMILY F-box domain 197 266 IPR036047 GO:0005515
Aev01g2607 617 CDD PAS 43 153 IPR000014 -
Aev01g2607 617 TIGRFAM sensory_box: PAS domain S-box protein 39 153 IPR000014 -
Aev01g2607 617 Gene3D - 482 615 IPR015915 GO:0005515
Aev01g2607 617 ProSiteProfiles PAS repeat profile. 39 114 IPR000014 -
Aev01g2607 617 SUPERFAMILY PYP-like sensor domain (PAS domain) 43 154 IPR035965 -
Aev01g2607 617 Pfam Galactose oxidase, central domain 363 412 - -
Aev01g2607 617 Pfam PAS domain 44 154 IPR000014 -
Aev01g2607 617 Gene3D PAS domain 29 165 - -
Aev01g2607 617 PANTHER ADAGIO PROTEIN 1-LIKE 1 616 - -
Aev01g2607 617 Gene3D - 279 481 IPR015915 GO:0005515
Aev01g2607 617 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 1 616 - -
Aev01g2607 617 Pfam Galactose oxidase, central domain 301 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2607 Aev-Chr1 29189914 29193670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2607 40 155 AGC Kinase Gene Family AT5G58140 32.759 6.93e-14 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2607 01 29189914 29193670 Aev01g2607 01 29189914 29193670 ECH