Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2604 ATGAGGTATATTAGGACCAACAGCTTGAAGAGGCTCTTCTCGTTGAGAAGGCGCGGTTCTGGGGAACATGTTCTGAGCCCGAGTTGTTCAACCGGTGGAGAAAACGATGAGGGGCTAGAGATTCTTCCGAATGAAGAATGTTCTCAAAGACCCTCTTGGAAATGCTTATCTTATGAAGAACTTTTTGATGCCACCAACGGTTTCAGCTCAGAAAATCTGGTTGGAAAGGGTGGCTATGCAGAGGTGTACAGGGGAACACTGAAAGATGGTGATGAAATTGCTGTGAAGAGGCTCACAAGAACTTGCAGGGATGAGAGAAAGGAGAAAGAGTTTCTAACAGAGATTGGTACTATTGGTCATGTAAATCATTCCAATGTTTTGCCTCTTCTGGGGTGTTGTATTGATAATGGGCTCTACCTTGTTTTTGAGCTATCCACAAAAGGCTCTGTTGCATCCCTTCTTCATGATGAAAAATTGCCTCCTGTGGATTGGAGAACAAGGCATAAGATAGTTCTTGGGACAGCACGTGGCCTCCACTACTTGCACAAAGGCTGCAAGAGAAGGATAATCCACCGGGATATCAAGGCATCAAATATTCTATTGACAGAAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAATGGACTCATCATTCAATTGCTCCAATAGAAGGGACATTTGGACATTTGGCCCCTGAGTACTATCTGCATGGTGTTGTTGATGAGAAGACAGATGTGTTTGCCTTTGGTGTGTTCTTGCTTGAAGTCATCTCTGGCAGGAAGCCTGTGGATGGCTCTCACCTAAGCCTCCATAGCTGGGCAAAACCAATATTGAAGAAAGGGGAGATAGAGAAGCTTGTGGATCCAAGGCTAGAAGGTGAATATGATGTAACAGAGTTAAGAAGACTTGCTTTTGCAGCATCCTTGTGCATTCGGGCATCTTCAATTTGGAGACCTACCATGAGTGAGGTATTAGAGGTAATGGAGGAGGGAGAGATTGAGAAAGAGAAATGGAAAATGCCAGAGGAAGAGGAAGAGCAGGAGGAAGAGTTTTGGGGTTTTGATGATCTGGAATATGAATATGACAGTTCCTTATCAATGTCACTACCTGATTCCACTGGAAGTACTTAA 1152 0.4375 MRYIRTNSLKRLFSLRRRGSGEHVLSPSCSTGGENDEGLEILPNEECSQRPSWKCLSYEELFDATNGFSSENLVGKGGYAEVYRGTLKDGDEIAVKRLTRTCRDERKEKEFLTEIGTIGHVNHSNVLPLLGCCIDNGLYLVFELSTKGSVASLLHDEKLPPVDWRTRHKIVLGTARGLHYLHKGCKRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHLSLHSWAKPILKKGEIEKLVDPRLEGEYDVTELRRLAFAASLCIRASSIWRPTMSEVLEVMEEGEIEKEKWKMPEEEEEQEEEFWGFDDLEYEYDSSLSMSLPDSTGST* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2604 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Aev01g2604 383 PANTHER OS04G0654600 PROTEIN 39 365 - -
Aev01g2604 383 Gene3D Phosphorylase Kinase; domain 1 39 143 - -
Aev01g2604 383 Gene3D Transferase(Phosphotransferase) domain 1 146 361 - -
Aev01g2604 383 PANTHER OS08G0249100 PROTEIN 39 365 - -
Aev01g2604 383 SMART serkin_6 68 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2604 383 ProSiteProfiles Protein kinase domain profile. 68 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2604 383 SUPERFAMILY Protein kinase-like (PK-like) 49 335 IPR011009 -
Aev01g2604 383 Pfam Protein tyrosine and serine/threonine kinase 71 273 IPR001245 GO:0004672|GO:0006468
Aev01g2604 383 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Aev01g2604 383 Coils Coil 95 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2604 Aev-Chr1 29170851 29174524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2604 54 358 Receptor kinase-like Gene Family AT4G33430 43.949 8.14e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aev01g2604 PK_Tyr_Ser-Thr 9.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2604 - - ahf:112697971 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2604 01 29170851 29174524 Aev01g2604 01 29170851 29174524 ECH
Aev01g2604 01 29170851 29174524 Aev04g1277 04 8365940 8370621 PCT