Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2600 ATGGCTGCGGATTCGTCTTTTGAGGGTGCTGCGCTTGATCCGTCTAAATGCAGTAAGATGAGTATGGAGGAAAAAAGAGAACTTGTGTATGAGATATCCAAATGGTCTCATGGTGCATCTGAGCTGCTACAGTCATGGAGTCGTCAAGAGATTTTACAAATATTGTGTGCAGAGATGGGGAAAGAAAGGAAATATACTGGGCTGACAAAGTTGAAGATAATAGAAAACCTTCTAAAAATTGTTGCTGAAAAGAAGTCTGGGGGGAATGAAATTGCAACAGAATCTGAACCACATTCTTCTCCTGCACATGGTCAGAAACCTGCTAAAAGGCAGAGAAAAACCGAGAATCCGTCTCGATTACCCGTGCCTGCAAACAGTGTTTCAGTCAATAGTGCTGGTGATCAGGGCAGTACCACATACTGCAAAAATTCAGCTTGCAAAGCTACCCTGAATCAAGGAGATGCATTTTGCAAAAGATGTTCATGCTGCATTTGTCACCAATATGATGACAACAAGGACCCTAGCCTGTGGTTAATATGTAGCTCTGAATCTCCGTTTTCTGGTGTTTCTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGTTGGGTCTGGCATTGGCAAAGATAGTCAACGTCCCAAGCTTGATGGAAGCTTCTGCTGTGTCTCTTGTGGGAAAATAAATGATTTACTCGGGTGCTTGAGAAAACAACTGATGGTAGCAAAGGATACCAGACGTGTGGACATACTATGTTACCGTGTCTCCTTAAGCCAAAGACTCCTACAAGGGACTGAAACCTATCAAAAACTTTATGAGATTGTTGATGAGGCAGTGAAGAAACTTGAACCAGAAGTAGGTCCATTGACTGGCTCACCGGTGAAGATCGGTAGGGGGATTGTGAATAGGCTATCATCAGGACCAGAGGTTCAGAAACTTTGCGGTTCTGCTCTCGAATCTCTCGATTCACTGCTTTCTAAAAGGGTCTTGCCTTCGCCACCCATTCAAGCTGTTAAAGATGCAAATTTGCTTTCTCCAAATATGGTGAGGTTTGAAGAAGTCACTGCAACATCCCTTACTGTTATTTTGGGATCTGAAAATGCTTCTGGAGAAAATACCACTGGTTACACCTTGTGGCATCGCAAAGCTGACGATGAAGACTATCCAGTGGACCCGACTTGCACTCTGCTTCTGCCAAATAGAAGGTTCAGTGTCAGGGATCTCGTTCCAGCTACAGAGTACAGTTTCAAAGTTGCTTCCAATGATTCAAGGGAGTCCGGTATGTGTGAGGTTCATATCTCAACAGAACATGGAGAGGATGAAGCCCCCAATTGCTCAGCAACAGAACGAAGCCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCCAATCCATCATCAGTGGAGGATGAGACCAATAACAGTAATCCGTATAGTGACCAGATTGACAATCGCTCGGACAATTACCGTGCTTATCGCAAGGATTCTGACCAGCTTGCTTCTGGAAATGTTTCTAACGATGCTATCAACTGTTCCAATATAGGTGCAGTGGGACTTCTTCCCGCCGATGCAGATTCTTTGTCAGACAAGCAGCATGCTGCAGGAATGGCCATCACCCTTCCTGGTTCTGATGTACTGAAGCATGAAAACAAGCATTCACCTGAGGAACAAGTCACCGAGGACACGAGCGCCGATGACGGGTTGAACTCCCCGGTGCTAACTGGGAGAGAGTGCGTGCCATTAGTGGCTAGCTCAGAAGGAGGCTTGCCTATTACACCCTGCAAGGTGGAAATACTCAAGGATGGGCCCGGAAGAAATGGGAGATCTAAATCCAGTGGCAAAGATCAACAAGAAAATGGAGCGGGGAAAAGGGATGGGCCACAAGATGGAAGCACTTCCAAGAAGCGAGGTGGTGATAGGCAGGATGAGGGTTGTTTGGCCAACGTGTTTCCAGACAGGGATTTCGAGTATTATGTGAAGGTGATTAGGTGGTTAGAGTGTGAAGGGCACATAGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTGAGAGCAACGCCCCAAGAAGTGAGGATTGTGAAGATATACATAGACACATTCCTTGAAGATCCAGCATCTCTTGCAGAGCAACTTGTGGACACTTTCTCAGAATGCATATCCAGCAAGAGAATCTCAACGGTCCCTGCAGGGTTCTGCATGAAGCTTTGGCATTGA 2220 0.4568 MAADSSFEGAALDPSKCSKMSMEEKRELVYEISKWSHGASELLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVAEKKSGGNEIATESEPHSSPAHGQKPAKRQRKTENPSRLPVPANSVSVNSAGDQGSTTYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLICSSESPFSGVSCGLSCHLECALKHVGSGIGKDSQRPKLDGSFCCVSCGKINDLLGCLRKQLMVAKDTRRVDILCYRVSLSQRLLQGTETYQKLYEIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGSALESLDSLLSKRVLPSPPIQAVKDANLLSPNMVRFEEVTATSLTVILGSENASGENTTGYTLWHRKADDEDYPVDPTCTLLLPNRRFSVRDLVPATEYSFKVASNDSRESGMCEVHISTEHGEDEAPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQIDNRSDNYRAYRKDSDQLASGNVSNDAINCSNIGAVGLLPADADSLSDKQHAAGMAITLPGSDVLKHENKHSPEEQVTEDTSADDGLNSPVLTGRECVPLVASSEGGLPITPCKVEILKDGPGRNGRSKSSGKDQQENGAGKRDGPQDGSTSKKRGGDRQDEGCLANVFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSKRISTVPAGFCMKLWH* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2600 739 ProSiteProfiles Fibronectin type-III domain profile. 346 441 IPR003961 GO:0005515
Aev01g2600 739 MobiDBLite consensus disorder prediction 601 643 - -
Aev01g2600 739 MobiDBLite consensus disorder prediction 543 572 - -
Aev01g2600 739 MobiDBLite consensus disorder prediction 436 485 - -
Aev01g2600 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 739 - -
Aev01g2600 739 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Aev01g2600 739 MobiDBLite consensus disorder prediction 446 485 - -
Aev01g2600 739 MobiDBLite consensus disorder prediction 594 643 - -
Aev01g2600 739 MobiDBLite consensus disorder prediction 545 559 - -
Aev01g2600 739 Pfam Fibronectin type III domain 347 421 IPR003961 GO:0005515
Aev01g2600 739 Gene3D Immunoglobulins 346 459 IPR013783 -
Aev01g2600 739 SUPERFAMILY Fibronectin type III 347 424 IPR036116 GO:0005515
Aev01g2600 739 MobiDBLite consensus disorder prediction 118 134 - -
Aev01g2600 739 MobiDBLite consensus disorder prediction 89 134 - -
Aev01g2600 739 CDD PHD_VIN3_plant 161 226 - -
Aev01g2600 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 739 IPR044514 GO:0010048|GO:0040029
Aev01g2600 739 CDD FN3 347 427 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2600 Aev-Chr1 29151817 29155829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2600 4 626 PHD Gene Family AT4G30200 47.432 5.41e-168 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2600 - - gmx:100794721 1266.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2600 01 29151817 29155829 Aev01g2600 01 29151817 29155829 ECH