Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2599 ATGGACTCTTGCTCTTCTTCTTCACCGCCAAACACACTCTCTTTCTCTCTTTCCAACCACTTTCCCAATTGCAACTCCACTTCCCCACACTCTTCCTCCTCTCACCTCTCCCTTTTCCACTCCTTCTCCGCAGCACCGGGCCCCACCAGCCTCTCCATTTTCACCGCCGGACCCAAGTTCGAGGACTTCCTTGGACCCTCCGCCGCCGCCACAACAACATGTGCACCACCGCACCTTCCACCCTTCTCCGCCGACCACCACAACAACACCGACATCTACGACTCAGAGCTGAAGTCAACCATCGCCGCCTGCTTCCCACGCGGCTTCGGCGCTGAAGCAACCGCCGAGCCGCAGAAACCCTCTCCTAAGAAAACAGTCGACACGTTCGGCCAGCGTACCTCCATCTACCGCGGCGTCACACGTCATAGATGGACCGGGAGATATGAAGCTCATCTTTGGGATAACAGCTGCAGAAGGGAAGGGCAAAGTAGAAAAGGAAGGCAAGTTTATTTGGGTGGCTACGATAAGGAAGACAAGGCAGCAAGAGCTTATGATCTCGCTGCTCTCAAGTACTGGGGTCCAACCACCACCACCAACTTTCCAATTTCCAACTATGAGAAGGAGCTGGAGGAAATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCCCTAAGAAGGAAGAGCAGTGGTTTCTCCAGAGGGGCCTCTATATACAGAGGAGTGACCAGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTCGCCGGAAACAAAGACCTTTACCTTGGCACTTTCAGCACCCAAGAGGAAGCAGCGGAAGCCTATGACATTGCAGCGATAAAATTCAGAGGACTAAATGCAGTAACAAACTTCGACATGAGTCGCTACGACGTGAAAAGCATCGCAAACAGCACCCTTCCCATTGGAGGATTATCAAGCAAGAACAAAACCTCCGCCGATGACCAACAACGAGATCCATCCTCAACCGTGACCTTCGCAGCAGCTCAGCAGCAGCAACCATCAAGCTGCTCAACTCTGAGCTTCGCCATTCCCATAAAGCAAGACCCTACAGATTACTGGTCCATCTTAGGGTACCCTAACAGCAACACTACAAGCACCGTCGTCACAACCACTTTTGCACCTTCAAACAGCAACAATAACGGCACTACTTCCTTGCACATGGACTTCTCTGTTGCACCATCCAACAGCAGCGATAACACCAATGCCGCGTTCTTCAATGGAGGAGGAGGGGGGATCTTTGTCCAACAACAACAGCAGAGTGGTGGGGGAAGCAGTGTTTCATCGTCGTCCAGTTCGTCGGTCCCGTTGGCCACGCCGATCTTCTCTCTGAACAGCAACAGTAGCAGTTACGAGAGCTCTTCTGGTGGATATGGAAGCTGGATTGGGCCTGCACTGCACACGTTCCAAGCCCATGCAAAACCCAGTCTCTTTCAGACGCCAATATTCGGCATGGAATGA 1488 0.5255 MDSCSSSSPPNTLSFSLSNHFPNCNSTSPHSSSSHLSLFHSFSAAPGPTSLSIFTAGPKFEDFLGPSAAATTTCAPPHLPPFSADHHNNTDIYDSELKSTIAACFPRGFGAEATAEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSTLPIGGLSSKNKTSADDQQRDPSSTVTFAAAQQQQPSSCSTLSFAIPIKQDPTDYWSILGYPNSNTTSTVVTTTFAPSNSNNNGTTSLHMDFSVAPSNSSDNTNAAFFNGGGGGIFVQQQQQSGGGSSVSSSSSSSVPLATPIFSLNSNSSSYESSSGGYGSWIGPALHTFQAHAKPSLFQTPIFGME* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2599 495 CDD AP2 134 203 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 SUPERFAMILY DNA-binding domain 236 297 IPR016177 GO:0003677
Aev01g2599 495 CDD AP2 236 297 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 ProSiteProfiles AP2/ERF domain profile. 237 295 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 ProSiteProfiles AP2/ERF domain profile. 135 201 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 117 441 - -
Aev01g2599 495 SUPERFAMILY DNA-binding domain 134 203 IPR016177 GO:0003677
Aev01g2599 495 Pfam AP2 domain 135 193 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 Pfam AP2 domain 237 287 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 Gene3D AP2/ERF domain 135 203 IPR036955 GO:0003700|GO:0006355
Aev01g2599 495 Gene3D AP2/ERF domain 237 297 IPR036955 GO:0003700|GO:0006355
Aev01g2599 495 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 441 - -
Aev01g2599 495 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 PRINTS Ethylene responsive element binding protein signature 277 297 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 SMART rav1_2 135 207 IPR001471 GO:0003700|GO:0006355
Aev01g2599 495 SMART rav1_2 237 301 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2599 Aev-Chr1 29131717 29134510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2599 76 495 AP2-EREBP Transcription Factor Family AT5G57390 55.408 1.62e-146 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev01g2599 AP2 2.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2599 K09285 - gmx:100803558 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2599 01 29131717 29134510 Aev01g2599 01 29131717 29134510 ECH