Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2598 ATGTATGCGAATACGAGCCAGTTCGACGGTAACGCAGCCTTCTCCGGCGGCGGATTCATGCCCTCTCAGGCTACTCAGGCCACTGAATCTTCCCTCACTCCTTCAAAGAATCGTGATGTTCAGTCGTTGCTTCCTCTGACAGTCAAGCAGATAACCGATGCGTATCAGTCTAGTGATGATAAAACCAATTTGATTGTCGATGGTGTCGACCTTAACAATGTTACTCTTGTAGGAAGGGTATGCAACAAGGCTTGGAGGGTTACTGATGTTACTTTTGTGCTTGATGATGGCACTGGAAGGATTGAGTGTAGTAAATGGCTTCAGGAAGCTGTGGATACAAATGACGTGGATGGTATCTTGGATGGAATGTATGTGCGTCTCCATGGACACTTGAAAGGCTTTCAGGGTAAAAAAACTTTGAATGTTTTCTCTTTTAGGCCAGTGACTGACTTTAATGAGGTTGCCAATCATTTCATTGAGTGTATATATGTCCATCTCTATAATTCCAGGCTTCGGGCTGGTGTCCCCAATCAGCAACATACTACCAATGCAGCACCAATTACTCCCACCAAGGGCTACCAAGCAGTCCCACCAAATCAATTCTCTGGTCAACAGAACAATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATGTTTTACATCTTCCAGCAAACACGACAAGGGACGAGGGAGTCCCTCGTGAACTTATTGCACATCACCTTGGAATTCCGATGGATAAGCTGATGTTGGCTATTAAAAATCTTATTGAGGAAGGTGCTATTTATGAAGCTATAGGAGATCACTATAAGTCAATCATCAATGGCTGA 828 0.4396 MYANTSQFDGNAAFSGGGFMPSQATQATESSLTPSKNRDVQSLLPLTVKQITDAYQSSDDKTNLIVDGVDLNNVTLVGRVCNKAWRVTDVTFVLDDGTGRIECSKWLQEAVDTNDVDGILDGMYVRLHGHLKGFQGKKTLNVFSFRPVTDFNEVANHFIECIYVHLYNSRLRAGVPNQQHTTNAAPITPTKGYQAVPPNQFSGQQNNGQKSVEDMVLDVLHLPANTTRDEGVPRELIAHHLGIPMDKLMLAIKNLIEEGAIYEAIGDHYKSIING* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2598 275 CDD RPA2_DBD_D 73 166 - -
Aev01g2598 275 PIRSF RPA32 2 273 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev01g2598 275 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 4 271 - -
Aev01g2598 275 Pfam OB-fold nucleic acid binding domain 74 146 IPR004365 GO:0003676
Aev01g2598 275 SUPERFAMILY "Winged helix" DNA-binding domain 207 271 IPR036390 -
Aev01g2598 275 Gene3D - 203 273 IPR036388 -
Aev01g2598 275 SUPERFAMILY Nucleic acid-binding proteins 43 169 IPR012340 -
Aev01g2598 275 Gene3D - 35 170 IPR012340 -
Aev01g2598 275 Pfam Replication protein A C terminal 165 267 IPR014892 -
Aev01g2598 275 PANTHER REPLICATION PROTEIN A-RELATED 4 271 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2598 Aev-Chr1 29119709 29122469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2598 4 272 Core DNA Replication Machinery Family AT2G24490 46.909 1.89e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2598 K10739 - gmx:100782819 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2598 01 29119709 29122469 Aev01g2598 01 29119709 29122469 ECH