Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2593 ATGATGAACAGCAGTAGTAGTAGTAGTTATGGAGAGGCGTTGAAAAGGAGATGGGAAGATCATCATCATAGGAGGACACAACAACAACAACAGATTAACATCATGCAGCAGCAGCAGCAGCAGCAGCAGGGCAGTGACACCATTAATCATAATAATAATAATAATAATTTTGGTTACTACTATGGTGGTAACAACAACAGCAACAACAACAGATTGTTCCAAGGGTGGTTCACTAATAATAATAAGAATGTGTTAGAGGAGGAGGAGGTAGTACTGTCGAGAGTAGTGCCGGCAGTGACAGTGGTGGTTGAAGGGCGTTCGATCTGCCAGCGCATCAGCCTCCAGAAGCATGGCAGCTACGAGAGCCTGGCAAAGGCACTGAGGCAGATGTTTGTGGAAGAAGAGACCACTGATCATGATCAGCTTCATCTTGATCTCTCAAATGCCATTCCTGGTCACCTTATTGCTTATGAGGACATCGACAACGATCTTCTTCTTGCTGGTGACCTTTCCTGGAAGGATTTTGTACGTGTGGCGAAGAGAATTCGGATACTTCCAGCGAAGGGGAACTCATCATCATCATCAAGGAAAGGTACAAGTACAAGATCAGGGGAATAA 618 0.4482 MMNSSSSSSYGEALKRRWEDHHHRRTQQQQQINIMQQQQQQQQGSDTINHNNNNNNFGYYYGGNNNSNNNRLFQGWFTNNNKNVLEEEEVVLSRVVPAVTVVVEGRSICQRISLQKHGSYESLAKALRQMFVEEETTDHDQLHLDLSNAIPGHLIAYEDIDNDLLLAGDLSWKDFVRVAKRIRILPAKGNSSSSSRKGTSTRSGE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2593 205 MobiDBLite consensus disorder prediction 1 56 - -
Aev01g2593 205 ProSiteProfiles PB1 domain profile. 96 189 IPR000270 GO:0005515
Aev01g2593 205 Gene3D - 94 199 - -
Aev01g2593 205 SUPERFAMILY CAD & PB1 domains 101 184 - -
Aev01g2593 205 MobiDBLite consensus disorder prediction 13 27 - -
Aev01g2593 205 MobiDBLite consensus disorder prediction 28 56 - -
Aev01g2593 205 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 28 194 IPR003311 GO:0005634|GO:0006355
Aev01g2593 205 Pfam AUX/IAA family 86 186 IPR033389 -
Aev01g2593 205 PANTHER AUXIN-RESPONSIVE PROTEIN IAA33 28 194 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2593 62 185 B3 DNA Binding Superfamily AT1G19850 29.032 6.44e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev01g2593 AUX_IAA 5.6e-13 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2593 - - thj:104813522 161.384