Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2579 ATGAATTTCCACCACAACACTACTACTTCTCTTCACCTAAGACAAGGTGATGAGAACCATCCACTCAACCTTGATCTCCTGCTTGAGCCATCATCATCTTCACTACTACTACCTCCTGCTGCCTCTGCAAATAACTCTTCTTCTTCTTCTGCCTCCATGGAGCCTAGGGTATTCTCATGCAACTACTGCCAGAGGAAGTTCTACAGCTCACAGGCCTTAGGGGGTCATCAGAATGCTCACAAGCTTGAGAGGACTCTGGCCAAGAAGAGCAGAGAGCTGAGCTCATCATCATCACCCATGCATGCTCATGGAGTGGTCATGGCAGAGCAGCAGCAACCATCACCCACCTTCTCTTCTCACTATCACCATCATCGTTCTATTGGGGTCATTGATAACCAAGGACAGATAGCAGGTAGCGGAGGAAGAGAGTTTGGTGGTGGCTATGCTTCTTCAAAACAAGGGGTGGTGATGATGTCTTCTTGGTCCCGTGGTTATGCTTCTGAGAATGTTCATCAGGAGGATATTACCAAACTTGATTTGTCCTTAAGGTTATGA 555 0.4721 MNFHHNTTTSLHLRQGDENHPLNLDLLLEPSSSSLLLPPAASANNSSSSSASMEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSSSSPMHAHGVVMAEQQQPSPTFSSHYHHHRSIGVIDNQGQIAGSGGREFGGGYASSKQGVVMMSSWSRGYASENVHQEDITKLDLSLRL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2579 184 Gene3D Classic Zinc Finger 41 116 - -
Aev01g2579 184 SUPERFAMILY beta-beta-alpha zinc fingers 55 85 IPR036236 -
Aev01g2579 184 PANTHER ZINC FINGER PROTEIN 1-LIKE 15 128 - -
Aev01g2579 184 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Aev01g2579 184 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Aev01g2579 184 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 128 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2579 Aev-Chr1 28984444 28984998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2579 1 184 C2H2 Transcription Factor Family AT5G57520 43.684 1.60e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev01g2579 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2579 - - gmx:100778014 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2579 01 28984444 28984998 Aev01g2579 01 28984444 28984998 ECH