Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev01g2579 | ATGAATTTCCACCACAACACTACTACTTCTCTTCACCTAAGACAAGGTGATGAGAACCATCCACTCAACCTTGATCTCCTGCTTGAGCCATCATCATCTTCACTACTACTACCTCCTGCTGCCTCTGCAAATAACTCTTCTTCTTCTTCTGCCTCCATGGAGCCTAGGGTATTCTCATGCAACTACTGCCAGAGGAAGTTCTACAGCTCACAGGCCTTAGGGGGTCATCAGAATGCTCACAAGCTTGAGAGGACTCTGGCCAAGAAGAGCAGAGAGCTGAGCTCATCATCATCACCCATGCATGCTCATGGAGTGGTCATGGCAGAGCAGCAGCAACCATCACCCACCTTCTCTTCTCACTATCACCATCATCGTTCTATTGGGGTCATTGATAACCAAGGACAGATAGCAGGTAGCGGAGGAAGAGAGTTTGGTGGTGGCTATGCTTCTTCAAAACAAGGGGTGGTGATGATGTCTTCTTGGTCCCGTGGTTATGCTTCTGAGAATGTTCATCAGGAGGATATTACCAAACTTGATTTGTCCTTAAGGTTATGA | 555 | 0.4721 | MNFHHNTTTSLHLRQGDENHPLNLDLLLEPSSSSLLLPPAASANNSSSSSASMEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSSSSPMHAHGVVMAEQQQPSPTFSSHYHHHRSIGVIDNQGQIAGSGGREFGGGYASSKQGVVMMSSWSRGYASENVHQEDITKLDLSLRL* | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev01g2579 | 184 | Gene3D | Classic Zinc Finger | 41 | 116 | - | - | |
Aev01g2579 | 184 | SUPERFAMILY | beta-beta-alpha zinc fingers | 55 | 85 | IPR036236 | - | |
Aev01g2579 | 184 | PANTHER | ZINC FINGER PROTEIN 1-LIKE | 15 | 128 | - | - | |
Aev01g2579 | 184 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 58 | 85 | IPR013087 | - | |
Aev01g2579 | 184 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 60 | 80 | IPR013087 | - | |
Aev01g2579 | 184 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 15 | 128 | IPR044246 | GO:0009788 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev01g2579 | Aev-Chr1 | 28984444 | 28984998 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev01g2579 | 1 | 184 | C2H2 Transcription Factor Family | AT5G57520 | 43.684 | 1.60e-28 | 102 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev01g2579 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev01g2579 | - | - | gmx:100778014 | 150.984 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev01g2579 | 01 | 28984444 | 28984998 | Aev01g2579 | 01 | 28984444 | 28984998 | ECH |