Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2566 ATGGGTAGAGCTCCATGTTGTGACAAGGCCAACGTCAAGAAGGGACCTTGGTCCCCAGAGGAGGATGCTGCTCTCAAATCCTACATAGAAACCAATGGAACTGGTGGCAATTGGATTGCTCTTCCTCAGAAAATTGGGCTGAAGAGATGTGGGAAGAGTTGTAGGCTTAGGTGGCTGAATTACTTAAGGCCAAATATCAAGCATGGCGGTTTCACTGAGGAAGAAGACAACATCATTTGCAGTCTTTACATTAGCATTGGAAGCAGGTGGTCCATAATTGCTGCACAGCTACCTGGAAGAACTGATAATGACATAAAGAACTATTGGAACACAAGGTTGAAGAAGAAGCTCCTAGGGAGGCGCAAACAACAATCTTGTTCATCAAAGGACACAAATGGAATTGCCACTTCTGTAGATGACAACAACTCTTGTTCTTCCAACAATGCTCTGAGCAGTTCTGCTATGGAGAGGCTTCAACTTCACATGCAACTTCAGAGCCTACAGAGCCCTTTCTCTTGCAACAACTCTGCTCTCTGGCCCAACAAGTTGCATCCTTTCCAGGAAAAGATCATCCACCAGACTCTCATTCATCAATCTCACAACAACAATAACAGCAACAACCCAATCATGATGATGATGATGCAAAATAATAATAATAATAATAATGAGGCAGCAGGAACAATAAAGATCAAAACCCCAAAGGTGGTTGCTGCTGCTGATGATCTTGCAGCACTAGTGAAGGAGAAACAGAACAATCCTATGATGAATAATCATGGTTCTGTTTCCTTCATTGGTTCTGAGAATAATGTTCCAATGCAGTCTTGTGATTCTAGCAATGTTATTGCACCAATGAGAGGAGATGATGGTACTGTGGGGATGATTCAGCAAGTTTGTGCACTGCAAACAGAACTTGATGACATCCTCAATAACACAACATCATCACTGGATAATTACATTCCACAGGTGGTTGCTGCTGAATTTAACTGTTTCAGAGAAATCAATAACAATAATAATAATAGTAACAGTTCATCAAAGGACAGCTTGATTTGGTGGTCTAATGATTCTGGTGATACAAAATCAGCATCATCAAATTCTTGGGATTCATCTACTACTACCCCAGTTCTTCTGCCAGAGGGGATGATGTTCCAAGATTATGACCTAGGGAACTGTCGTCGGTCTCCAACTCCTCGCACAGCTCCTCTCCAAGGCGCGGGGGTGGTTTCCCTGAAAGGACTCCGAAGCTTAAGTCACGCGGATTACTCGGCGTCATCATCCGCTTTGTGGATAAGCGTCCGCCCTTTTCGGGGGAACGTGCATATCTCTCCCTCGGGTCGGATCATGATACCCGGACCCGGGTTTGGTTTCAGGTCCTTTAGGTCGGGTCGGGTCGGTGAATCCGTACCCGGATCCGTTTGCGACCCATTAGCAATGGATTACCCATTCCTTATTGGGCCTTGA 1458 0.4472 MGRAPCCDKANVKKGPWSPEEDAALKSYIETNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQQSCSSKDTNGIATSVDDNNSCSSNNALSSSAMERLQLHMQLQSLQSPFSCNNSALWPNKLHPFQEKIIHQTLIHQSHNNNNSNNPIMMMMMQNNNNNNNEAAGTIKIKTPKVVAAADDLAALVKEKQNNPMMNNHGSVSFIGSENNVPMQSCDSSNVIAPMRGDDGTVGMIQQVCALQTELDDILNNTTSSLDNYIPQVVAAEFNCFREINNNNNNSNSSSKDSLIWWSNDSGDTKSASSNSWDSSTTTPVLLPEGMMFQDYDLGNCRRSPTPRTAPLQGAGVVSLKGLRSLSHADYSASSSALWISVRPFRGNVHISPSGRIMIPGPGFGFRSFRSGRVGESVPGSVCDPLAMDYPFLIGP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2566 485 CDD SANT 71 113 IPR001005 -
Aev01g2566 485 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev01g2566 485 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aev01g2566 485 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev01g2566 485 PANTHER OS09G0431300 PROTEIN 1 312 - -
Aev01g2566 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev01g2566 485 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev01g2566 485 CDD SANT 16 62 IPR001005 -
Aev01g2566 485 Gene3D - 69 140 - -
Aev01g2566 485 SMART sant 13 64 IPR001005 -
Aev01g2566 485 SMART sant 67 115 IPR001005 -
Aev01g2566 485 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev01g2566 485 PANTHER MYB DNA-BINDING DOMAIN SUPERFAMILY PROTEIN-RELATED 1 312 - -
Aev01g2566 485 Gene3D - 7 68 - -
Aev01g2566 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2566 Aev-Chr1 28909771 28912601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2566 1 186 MYB Transcription Factor Family AT5G57620 77.128 4.83e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g2566 Myb_DNA-binding 5.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2566 K09422 - gmx:778083 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2566 01 28909771 28912601 Aev01g2566 01 28909771 28912601 ECH