Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2557 ATGACCACTCACTTCCCCATTCATAATACAAAAACCGCACCCAAAGAAATCAACTCACCTCTCCAGCAACATAACATTGCACTTCCTCCAATAACCCCTCTCTCTCTCTCTCTCTCTCTCTCAACAGCACAGCACAGCACAACACAACACAGCGCACTACTCCTACTCTCAAGACTAAGAAGTAACAGAACCGCCTCCATGGGGATTGAGAGAGGAGGCTTAAAGGGATTCAGGAGCGGCTGGAGCGTGCCGCCCAAGCCATGCGATTCCTGTAAGCTGGTTTCGGCGGCGCTCTTCTGCCGCCCCGATTCAGCCTTCCTCTGCATCGCCTGCGACTCCAAAATTCACTGCGCAAACAAGCTTGCTTCGCGTCACGAGCGCGTGTGGATGTGTGAGGTGTGCGAGCAAGCACCTGCTGCGGTCACGTGCAAGGCAGACGCTGCCGCCCTCTGCGTCACGTGCGATTCTGACATCCACTCAGCCAACCCTCTCGCACGCCGCCACGAGCGCGTCCCCGTGGAGCCCTTCTTCGACTCCGCCGAGTCCATCGTGAAGGCCTCCGCCGCCGCCTTCAGCTTCGTAGTTCCCACCGACGCCGCCGCCGCCGACAACGGTATGTCTTCCGATGGTTTCGTAAACGAGGATAACGCCTGGCTAATCCCGAACCCGAATTTTGGGTCCAAACTCATGGACGCTCCGGATATGAAGTCCAGGGAGATGTTCTTCTCTGAAATGGATCCGTTTCTCGATTTCGATTACTCGAACTCCTTCCAGAACAACAACAGCGCCGGAAACGACAGCGTCGTTCCGGTTCAGACCAAACCTCCTGCTCCAGCTCCGGTGATGAACGAAAATAGCTGCTTCGACATCGATTTTTGCAGATCGAAGCTGTCCTCCTTTAACTATCCATCACAGTCTATTAGCCAAAGCGTTTCATCGTCTTCGCTTGATGTGGGAGTGGTGCCGGACGGGAACACAGTGTCGGAGATATCGTATCCGTTCGGGCGGAACTGTTCGGATTCGAGTGGGATGATGACGCCGGGGGGAAGCGGCGGGGGAGCGACGCAGTTGTGCGGGATGGACCGTGAGGCTAGGGTTCTGAGGTACAGGGAGAAGAGGAAGAACCGCAAGTTCGAGAAAACCATTCGATACGCATCGCGAAAGGCTTATGCGGAAACCAGGCCAAGGATCAAAGGGCGGTTCGCTAAGAGAACCGAAATCGAATCGGAGGTGGACCGCCTCTACAGCCCCGGCGCCGCCGTGCCCGGGTCCCTCATGCTCGACTCTCAGTACGGCGTCGTGCCGTCGTTTTAG 1314 0.5639 MTTHFPIHNTKTAPKEINSPLQQHNIALPPITPLSLSLSLSTAQHSTTQHSALLLLSRLRSNRTASMGIERGGLKGFRSGWSVPPKPCDSCKLVSAALFCRPDSAFLCIACDSKIHCANKLASRHERVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESIVKASAAAFSFVVPTDAAAADNGMSSDGFVNEDNAWLIPNPNFGSKLMDAPDMKSREMFFSEMDPFLDFDYSNSFQNNNSAGNDSVVPVQTKPPAPAPVMNENSCFDIDFCRSKLSSFNYPSQSISQSVSSSSLDVGVVPDGNTVSEISYPFGRNCSDSSGMMTPGGSGGGATQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIESEVDRLYSPGAAVPGSLMLDSQYGVVPSF* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2557 437 CDD Bbox1_BBX-like 131 173 - -
Aev01g2557 437 ProSiteProfiles Zinc finger B-box type profile. 126 173 IPR000315 GO:0008270
Aev01g2557 437 ProSiteProfiles CCT domain profile. 362 404 IPR010402 GO:0005515
Aev01g2557 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 74 437 IPR045281 GO:0009909
Aev01g2557 437 CDD Bbox1_BBX-like 87 130 - -
Aev01g2557 437 SMART bboxneu5 131 173 IPR000315 GO:0008270
Aev01g2557 437 SMART bboxneu5 83 130 IPR000315 GO:0008270
Aev01g2557 437 Pfam CCT motif 362 404 IPR010402 GO:0005515
Aev01g2557 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 74 437 - -
Aev01g2557 437 ProSiteProfiles Zinc finger B-box type profile. 83 130 IPR000315 GO:0008270
Aev01g2557 437 Pfam B-box zinc finger 128 173 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2557 Aev-Chr1 28861078 28862502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2557 67 437 C2C2-CO-like Transcription Factor Family AT5G57660 55.118 3.10e-125 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aev01g2557 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2557 - - gmx:100805693 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2557 01 28861078 28862502 Aev01g2557 01 28861078 28862502 ECH