Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2552 ATGGCAAAAGCAAACTATTACGGGTTCCATTTTTGTTTTGTTACCATCCTACTAATAGTTTTTCAGTTTGGAGGAGTAGTGAGTGGTGAACCACTCCTAGGGGGGAAAAAGTTGATAATTGGGGTACCCTACAAATCTGGTTTTACGGAATTTGTGGATGTAAAGCTAGACCCTAAAACACAGCAATTGGTCCAAGTCACTGGATACCCCATTGATATCTTCAACGCCACACTTGATTACATCTTACGTTACTGCGGTTTCAATGTTTCTTATGACTTTAAGCCTTTCATCAACGAAACAGGACATAGTGCTGGGACTTACGACGATCTTGTTAAACAGGTTTATAATCACCAGTATGATGCGGTGGTTGGAGATGTATCAATAGTGGGGAAGAGAAGCGAGTATGTGGATTTCACATTACCATATGCGGAGTCAGGTGTGAGGATGCTTGTGCGAGTTGGGCACTGTAGACATCTAAACATGTGGATATTTTTGCGGCCATTTAGTTGGGATCTTTGGTTGTCCATAGCTATTGCCTCTGCCTCTATAGGAGCTACCATACGATTCATGGAACGTACCGTACTTCATGATTCACAAGAACAACTTGAATTAGGTTCACCGCCTCCACGACGACAAAAACAACTTAAGGACTTATCAATCATATGGCTCCTCCCTCTCGCACAAGTCGTGCTTCCTGACAGAGAATCAGTTGCCAAGAGCTGCTCCAAGTTTGTATTGGTGGTGTGGTTGATACTTGCATTTGTGCTGATGCAAAGCTACACTGCGAGCTTGTCATCGATTTTGACCGTGGATCAATTGCAGCCAAGCAATCCAACGATGGGTGATTTGAAAAGAAGTGGTGAAAAAATTGGGTATTTGACGGGTTCCTTTGTATATGATCTGCTGGTTGACAAATTGAAGTTTGATAAATCAAAGCTGAAGGAAATCTCAAAGATCGAAGATTATAAGAAGGAATTAGACAAAGGGTCTGGAAATGGCGGTGTTGCTGCTATATTTGATGAAACCCCATACATCAAGATGTTCCTCAAAAAATATGGTTCCAACTATATGATGCTTGGGAGCCCTCGCTACCGCAATGATGGCCTTGGCTTTGTATTTCCATTCAACTCCAACTTAACCTCGTACTTTTCAAGAGCAATCTTGAACGTGACTCAAAATGACTCGTTTATGGAGCCACTTGGACAAAAGTATTTTGGTACGGACTATGATCTCCAAGATGACGACTCTGATAAGCAGTTATCATCGAATTCAAATGCGGCAAGCCTTACCACACAAAGCTTTGCAGGGTTATTCATGATAACAGGAATTGCGACGGTTTTGGCATTGGTAGTATCTGAAAGCCACATTTGGAGGAAACCTATTACACTAGCCAAAGTTTGCAGTCAAAAGTTGTTGCTCTCTCCTCCTTGGAGAAAATTTAATGAGCAAAATCCAGCAGATAACTCTACAGTGGCTCCAGAGAATGATGGAAGTAATAATTCCATCAATGAACCAAATGGAATTTTGGAAACGAATTCCAACCGACCTTTACAGCCAATAATGCATGTATAG 1572 0.416 MAKANYYGFHFCFVTILLIVFQFGGVVSGEPLLGGKKLIIGVPYKSGFTEFVDVKLDPKTQQLVQVTGYPIDIFNATLDYILRYCGFNVSYDFKPFINETGHSAGTYDDLVKQVYNHQYDAVVGDVSIVGKRSEYVDFTLPYAESGVRMLVRVGHCRHLNMWIFLRPFSWDLWLSIAIASASIGATIRFMERTVLHDSQEQLELGSPPPRRQKQLKDLSIIWLLPLAQVVLPDRESVAKSCSKFVLVVWLILAFVLMQSYTASLSSILTVDQLQPSNPTMGDLKRSGEKIGYLTGSFVYDLLVDKLKFDKSKLKEISKIEDYKKELDKGSGNGGVAAIFDETPYIKMFLKKYGSNYMMLGSPRYRNDGLGFVFPFNSNLTSYFSRAILNVTQNDSFMEPLGQKYFGTDYDLQDDDSDKQLSSNSNAASLTTQSFAGLFMITGIATVLALVVSESHIWRKPITLAKVCSQKLLLSPPWRKFNEQNPADNSTVAPENDGSNNSINEPNGILETNSNRPLQPIMHV* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2552 523 CDD GluR_Plant 36 398 - -
Aev01g2552 523 SMART GluR_14 37 407 IPR001320 GO:0015276|GO:0016020
Aev01g2552 523 Pfam Ligand-gated ion channel 407 444 IPR001320 GO:0015276|GO:0016020
Aev01g2552 523 SUPERFAMILY Periplasmic binding protein-like II 30 408 - -
Aev01g2552 523 Gene3D - 32 160 - -
Aev01g2552 523 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 13 490 - -
Aev01g2552 523 MobiDBLite consensus disorder prediction 481 523 - -
Aev01g2552 523 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 13 490 - -
Aev01g2552 523 Pfam Bacterial extracellular solute-binding proteins, family 3 95 406 IPR001638 -
Aev01g2552 523 MobiDBLite consensus disorder prediction 478 523 - -
Aev01g2552 523 Gene3D - 161 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2552 Aev-Chr1 28819456 28822373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2552 35 451 Ion Channels AT5G11210 35.885 2.33e-77 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2552 K05387 - aip:107641909 601.282