Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2549 ATGGGAAAGCCTTTGCTGAACATGGAACACAGATTCCAACATGACTTAGGGATGGTGCAAAGATGGAGGGAAGCTCTTGTGCAAGTGACCAATCTCTCTGGTTCGGATTTACAGAGCAAGCCACAGTTCAAAGAAACTGAAAAGATTGTCAAAAGGGTTATGAGCATACTGGGTAACAAATCTTCTTGTCTTCCTAATGACCTAGTTGGGATGCACTCTCATGTGAATGAATTGGAAAAGCATCTCGTCTTGGACTCCCACAATGATGTTCAAGTTGTAGGGATATGGGGGATGGGCGGAATAGGGAAGACAACTCTTGCTCAAGTTTTGTACCATAGAATCTCTCATCAATATGACGCTTCTTGTTATATCGATGATGTAAGTAAAGTTTATCAGGGCCATGGTCCACTTGGTGTACATAAACAGCTTCATTGTCAAGTTCTAAACGAAGAAAATCAAGAGGTATGGAATCTTTCCAAGGCAACCTATTTGACAAGAACTATTCTATCTAGAGTGAAGGCTTTTATTGTTCTTGATAATGTTAATGAAGTGGAACAATTGGAGGGACTGTCTGTCAATCGTGAGTTGCTATGTGCTGGAAGCAAAATCATTATTGTTTCTAGAAATAAGCATATCTTTGAACAGTTTGGAGTGAATAAAGTTTACCAAGTTCAATGCTTGAATAAGGATGATTCCCTCCATTTGTTTTGCAGAAAAGCCTTCAAATGTGATTATATTTTGAGAGAATATGAAGAGCTGACACGTCGAGCATTATATTATGCTCAAGGTCATCCCTTAGCAATTAAAATATTGGGATCATTTCTATTGGGTCGAGATATTTCCGAGTGGAGAAGCGCCTTAGATAGTCTTGGAGATAATCCAAAGAGAGAGATTATGGATGTGCTTCGAATAAGTTTTGATCGATTGGAACGTGCACAAAAGGAAATATTTTTAGATATTGCTTGTTTTTTTAATCGTAGAGATGAGATGGATGTGAAGAAAATTCTAAACTGTTGTGGATTTCATCTGGATATTGGTATAAGAGTTCTTAATGATCAATCACTTATAACCATTACTCAAGATGGGCGTATCAAAATGCATGACATGTTGGTGGAGCTGGGGAAGAAAATAGTTCGTGAAAAAGCACCTACTGAGCCCGGGAAATGGAGTAGGATATGGCATTTCAAGGATTTTCTTAACATAGTGGTCGACGAGACAATGGAAGATCTTAAAGCCCTACAGTTAGTAAGATATCCACGAGGGAGGAATCAAAAGGAAGCATTAAGGGCAGAAGTATTATCAGCAATGAGTTGCCTTCGATTGCTCATAATTGAATATACGAATTTCAGTGGAAGCCTTGATTGTCTTTCCAACAAACTACAATATCTAAAGTGGCATGGATATCCTTTCACCTATTTGCCGTCTAGTTTTGAGACAACTAAACTAGTTGAATTGCTTTTACCTGGTAGCAAAATCAAAAGACTATGGGAAGACACTAAGCATTTGCACAATTTGAGAATTATGGATCTTGGGTTTTCTGAGAATCTTATCAAGACACCAAATTTTAGAGGCTTAACAAATCTTGAGGAGCTAAATCTTGAACAATGCACAAAACTTGTGGAGATCCATCCATCAATTGGACTTCTCAAGAAGCTTAGGGTGTTGAATTTGCGAGACTGCACTAGTTTAAGGAGTCTCCCGTACTGA 1707 0.3837 MGKPLLNMEHRFQHDLGMVQRWREALVQVTNLSGSDLQSKPQFKETEKIVKRVMSILGNKSSCLPNDLVGMHSHVNELEKHLVLDSHNDVQVVGIWGMGGIGKTTLAQVLYHRISHQYDASCYIDDVSKVYQGHGPLGVHKQLHCQVLNEENQEVWNLSKATYLTRTILSRVKAFIVLDNVNEVEQLEGLSVNRELLCAGSKIIIVSRNKHIFEQFGVNKVYQVQCLNKDDSLHLFCRKAFKCDYILREYEELTRRALYYAQGHPLAIKILGSFLLGRDISEWRSALDSLGDNPKREIMDVLRISFDRLERAQKEIFLDIACFFNRRDEMDVKKILNCCGFHLDIGIRVLNDQSLITITQDGRIKMHDMLVELGKKIVREKAPTEPGKWSRIWHFKDFLNIVVDETMEDLKALQLVRYPRGRNQKEALRAEVLSAMSCLRLLIIEYTNFSGSLDCLSNKLQYLKWHGYPFTYLPSSFETTKLVELLLPGSKIKRLWEDTKHLHNLRIMDLGFSENLIKTPNFRGLTNLEELNLEQCTKLVEIHPSIGLLKKLRVLNLRDCTSLRSLPY* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2549 568 Gene3D - 226 310 IPR042197 -
Aev01g2549 568 Pfam NB-ARC domain 73 296 IPR002182 GO:0043531
Aev01g2549 568 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 64 567 IPR044974 GO:0006952
Aev01g2549 568 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 64 567 - -
Aev01g2549 568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 320 IPR027417 -
Aev01g2549 568 Pfam Leucine Rich Repeat 481 500 IPR011713 -
Aev01g2549 568 Gene3D - 42 221 IPR027417 -
Aev01g2549 568 Gene3D Ribonuclease Inhibitor 403 568 IPR032675 -
Aev01g2549 568 SUPERFAMILY L domain-like 420 567 - -
Aev01g2549 568 SUPERFAMILY "Winged helix" DNA-binding domain 297 400 IPR036390 -
Aev01g2549 568 PRINTS Disease resistance protein signature 92 107 - -
Aev01g2549 568 PRINTS Disease resistance protein signature 168 182 - -
Aev01g2549 568 PRINTS Disease resistance protein signature 547 563 - -
Aev01g2549 568 PRINTS Disease resistance protein signature 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2549 Aev-Chr1 28788296 28795752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2549 69 567 WRKY Transcription Factor Family AT5G45050 33.142 3.28e-75 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2549 - - mtr:MTR_4g080777 609.757