Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2548 ATGCTTGCATTGCTATGTGCTGGAAGCAAAGTTATTGTAGTTTCTAGAAATAAGCATATCTTTGAACAATTTGGAGTGAATAAAGTTTACCAAGTTAAGTGCTTGAATGAGGATGATGCCCTTCAGTTGTTTTGCAGAAGAGCCTTCAGATCTGATTATGTTTTGAGAGAATATGAAGAACTGACATATCGAGCATTAGAATATGCTCAAGGTCATCTCTTAGCAATTCGAGTATTGGGATCGTCTCTATTGTTGGGTCGAAATATTTCTGAGTGGACAAGTGCCTTGGATAGCCTAAGAGATGATCCAGACAAAGAGATTATGAATGTGCTTCGAATAAGTGTTGATGGACTGAGATACACAGAAAAGGAAATATTTTTAGATATTGCTTGTTTCTTTAACTGTCAAGACAGCATACAAGTGAAGAGGATTCTAAGTTGTTTTGGATTTCATCCCGAAATTGGCATAAGAGTTCTAACTGATCAATCACTTATATCAGTTGATCAATGTAGGGTTATCAGAATGCATGATATGCTCGTGGAGCTGGGCAAGAAAATCGTTCGTGAAAAAGCACCAAAAGAGCCAAGAAAGTGGAGTAGGATATGGCGTAACAAGGATTTTCAAAATATTATATCAGACAAAATGACAATGGAGGACCTTGAAGCTGTACAATTAGATAGAGATGTACAAGAGATGGATCAAAAGAAAGCATTAAGGGCAGAAGTATTATCAGCAATGAGTCACCTTCGATTGCTCATAGTTAAGGATGCGTATTTTAGTGGAAGCCTTGATCGTCTTTCCAACAAATTACAATATCTAGACTGGTTTGGATATCCCTTCTACAATTTGCCCTCTAGTTTTGAGCCAAATGAACTAGTTGAAATGATCTTACCTTGTAGCACTATCACAACATTATGGGAAGGCACTAAGCATCTGCACAGTTTGAGAATTATGAATCTTCAGCACTCAAAAAATCTTATCAAGACACCGGATTTTAGAGGCTTAACAAATCTTGATGAGCTATATCTTGAAGGATGCACAAAACTTGTGGAGATCCATCCATCAATTGGACTTCTGAGGAAGCTTATAGTGTTGAATCTGAAAAACTGCATAAGTTTGAGGAGTCTCCCATACAGCGTATTTTGTCTCAGTTCACTTGAAGTACTGAATCTCTCTCGCTGTTCAAAAGTATTTAGTAACCAGCTGTCAGGGAATGGAAGACATGCAGAACATTTGAAGAAGCTTGATGTTAGTGAAACTGATATGAAATGCAAATCAACTTCTTCCATCCTCAAAAAGATTTATTTTCAGTTCTTCAGTTCTCCAAAGAAGAACAAAATAGTAGGCTTGTTATCGCCTAGTTTCCAATGTCTGCAAGAGCTAGATCTATATTTCTGCAATCTACATAGAATCCCAGATGCTATTGGATGCTTACATGGTTTGGAAAAACTGAATTTGGGAGGTAATAATTTTGTTGCTCTGCCATCTAGCATGAAGGAGCTTCCAAGACTCAAAAGTCTATACTTGATGCACTGCCAGCAGTTGAAATATTTACCTGAACTCACATTAAGTACTGATTTACTAACAAGAACTAAAACAACATTTGTTTTTTATGAGAACATTCTACCTGGTTTATATATTTTCAACTGCCCTAACTTGACTGAGATAGAAAACTGGAGCAATATTGCTGTTTCATGGATGATACAATTCCTTAAGATCCACCACCAATCCTGGCCGCGCCGTGCTGAATTTCATTGTGTAGTACCTGGAAGTCAAGTTCCAATGTGGTTCGACAAGCAAAGTTCAGATAATACATTAGTGTTGGATCCAGTTCTCATGCATGACAGTGAATGGATTGGACTTGCTTTGTGTGCAGCATTTGTTGCACCAGTTGATTATTCAGCCATTTTGGATGAGAGTACAGGACACCTCCCAATGCAGTTCTCTTTGGGTCGTTGTGCGACCGGATCGGGTGCCTGCTTCTTTATTCCTGTACTTATGGATAAGGGTCTGGTAAAGGATGATTCCCATCACCTCCTTCTACTCTATCTTCCACGAGAAGCTTTGATATGGGACACAAGAAAGAAATATGATCTTCTTGATGGTAACACAAGGGAAGTCTTTCTGAGATTCTCCTTCACACAGGTACCTGGTTATAAGTATGTTGTGAAGAAGTGGGGGTTTCGTTTGGTATTTAAACAAGATTTGGAATCGGAAGAATGGATCCCAACAATGTCAAATATGAATTTAGAACCCAAGATGATGTTGGATAGAAACTTCTGCATGCAAGAAAACAGAGCCTAA 2304 0.3828 MLALLCAGSKVIVVSRNKHIFEQFGVNKVYQVKCLNEDDALQLFCRRAFRSDYVLREYEELTYRALEYAQGHLLAIRVLGSSLLLGRNISEWTSALDSLRDDPDKEIMNVLRISVDGLRYTEKEIFLDIACFFNCQDSIQVKRILSCFGFHPEIGIRVLTDQSLISVDQCRVIRMHDMLVELGKKIVREKAPKEPRKWSRIWRNKDFQNIISDKMTMEDLEAVQLDRDVQEMDQKKALRAEVLSAMSHLRLLIVKDAYFSGSLDRLSNKLQYLDWFGYPFYNLPSSFEPNELVEMILPCSTITTLWEGTKHLHSLRIMNLQHSKNLIKTPDFRGLTNLDELYLEGCTKLVEIHPSIGLLRKLIVLNLKNCISLRSLPYSVFCLSSLEVLNLSRCSKVFSNQLSGNGRHAEHLKKLDVSETDMKCKSTSSILKKIYFQFFSSPKKNKIVGLLSPSFQCLQELDLYFCNLHRIPDAIGCLHGLEKLNLGGNNFVALPSSMKELPRLKSLYLMHCQQLKYLPELTLSTDLLTRTKTTFVFYENILPGLYIFNCPNLTEIENWSNIAVSWMIQFLKIHHQSWPRRAEFHCVVPGSQVPMWFDKQSSDNTLVLDPVLMHDSEWIGLALCAAFVAPVDYSAILDESTGHLPMQFSLGRCATGSGACFFIPVLMDKGLVKDDSHHLLLLYLPREALIWDTRKKYDLLDGNTREVFLRFSFTQVPGYKYVVKKWGFRLVFKQDLESEEWIPTMSNMNLEPKMMLDRNFCMQENRA* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2548 767 Pfam Leucine rich repeat 458 513 IPR001611 GO:0005515
Aev01g2548 767 SUPERFAMILY L domain-like 175 561 - -
Aev01g2548 767 Gene3D - 34 119 IPR042197 -
Aev01g2548 767 Pfam NB-ARC domain 8 105 IPR002182 GO:0043531
Aev01g2548 767 Gene3D Ribonuclease Inhibitor 184 400 IPR032675 -
Aev01g2548 767 Gene3D Ribonuclease Inhibitor 401 576 IPR032675 -
Aev01g2548 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 129 IPR027417 -
Aev01g2548 767 Pfam C-JID domain 588 737 IPR045344 -
Aev01g2548 767 Pfam Leucine Rich Repeat 292 310 IPR011713 -
Aev01g2548 767 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 742 IPR044974 GO:0006952
Aev01g2548 767 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 7 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2548 Aev-Chr1 28778694 28781326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2548 9 391 WRKY Transcription Factor Family AT5G45050 32.010 4.52e-55 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2548 - - mtr:MTR_4g080777 614.764