LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g2541	ATGCTCTCAAGATCTTGCTTAGGGCTATTGAATTTGGTATCGGTGGACGATTACCACGCGCTGAGCCGCGTGCCGAGCCTGATGGCGGTTACGGGAGGAGTGACCAACGAGTCCCACAACAGCCGCGAAGACCGTAACAACCTCGGATCCGACGAGGCCGTTTCGCCGGTCCCCCAAGAGCGAAGGATCATCGTTGCGAACCAGCTACCCATACGCGCCACGCGCGACCCAAACGACGGCAAGAGATGGAGCTTCGAGTTCGACTCCGACAGCCTGTACCTTCAGCTGAAGGACGGGTTCCCATCCGACGTGGAAGTCCTCTACGTGGGTTCCCTCAAGGCCGACATCGACCCTTCCGAGCAGGACGAGGTTTCTCAGCTCCTCCTCGAGAAATTCCGCTGCGTGCCCACCTTCCTCCCCTCTGAGATTCACAACAAATTCTACCATGGCTTCTGCAAGCACTACCTCTGGCCTCTGTTCCATTACATGCTTCCCATGTCGCCCAGCCACGGCGCCCGTTTCGACCGCGCCCAGTGGCAGGCCTACGTCCTCGCCAACAAGATCTTCGCCGACAAGGTCACCGAGGTCATAAACCCGGACGAGGACTATGTCTGGGTGCACGATTACCACCTCATGATATTGCCCACTTTCCTGAGGAAGCGTTTCCACCGCGTCAAGCTTGGGTTTTTCTTGCATAGCCCTTTTCCTTCCTCGGAAATCTACAGGACCCTGCCCGTTCGCGATGATATCTTGAGGGCCTTTCTGAACTGCGATTTGGTTGGTTTCCACACGTTCGATTACGCGAGGCATTTCCTGTCCTGTTGCAGCAGGATGTTGGGTTTGGACTACGAGTCCAAGAGGGGTTACATTGGATTGGATTATTACGGTCGAACGGTTACCATCAAGATTTTACCTGTTGGGATTCACATGGGCCAGCTCGACTCGGTCTTGTCTCTGCCCACCACCGCTAAGAGGGTTGAGGAGCTGAGGGAGCAGTATGAGGGTAAGGTTGTGATTCTGGGTGTGGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCCTGGCATTGGGTCAGCTTTTGGAGGTGCATGAAGGATTGAGGGGGAAGGTGGTGCTGGTTCAGATTCTCAACCCTGCGAGGAGCAGAGGAAAGGATATTCAGGATGTTAAGAGTGAATCTGAGTCAATTGCTATGGAGATTAACGAGAAATATGGGAGGCCTGGGTACCAGCCAATTGTGTTCGTCAATGGCCCTGTTTCTACTCAGGAGAAGGCTGCATACTATGCTATTTCTGAGTGCTGTGTGGTGAATGCGGTGAGGGATGGGATGAACTTGGTGCCTTATACATACACTGTTTGCAGGCAGGGGAGTGTTGCATTGGACAAGGCACTGATTGGGGTTGTTGAAGATGGTGGAGCTGAAGCTGCCAGGCCTAAACAGAGTGTTATCATTGTCTCCGAGTTCATCGGTTGCTCGCCCTCGCTCAGCGGGGCAATCCGGGTGAATCCTTGGAACATTGAGGATGTTTCTGAGGCGATGAACTCTGCCATCACAATGCCGGAGGCAGAGAAGCACTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCTCATGATGTGGCGTATTGGGCTAAGAGTTTTGATCAGGATTTGGAGAGGGCTTGTAGGGAGCATTACCGCAAGAGGTATTGGGGTGTTGGGTTTGGCCTTGGCTTCAGAATTGTTGCCTTGGATCCTACCTTTAGGAAGCTCTCGGTGGATAACATTGTCTCTGCCTACAGAGATACTCAGAGCCGGTTGATCCTTCTGGATTATGATGGCACAATGATGCCTCAGGCATCAATTAACAAAACTCCAAGCAGTGAGGTTATCTCTGTATTGAACTATTTATGCAGTGATCCCAAAAACATGGTATTCATTGTGAGCGGCAGAGACAAGGATTGCCTAAGCAGGTGGTTTTCTCCCTGTGAGAAGTTGGGGCTATCCGCGGAGCATGGTTACTTCACTAGGTGGAGTAGGGACACTGCTTGGGAGACTTGTGGGTTGACAACGGATTTCGATTGGAAGAGGATGGCAGAACCTGTGATGGCGCATTATACAGAAGCAACGGATGGTTCTTTCATTGAACATAAGGAAAGTGCTGTGGTTTGGCACCACCAAGAAGCTGATCCATATTTTGGATCATGCCAAGCGAAGGAGCTCCTTGATCACCTCGAGAGTGTGCTGGCTAATGAGCCAGTGGTGGTTAAAAGGGGACAACACATTGTTGAAGTCAAACCTCAGGGTGTGAACAAAGGTATAGTTGTGGAGAACCTTATCTCAAGCATGAGAAGTGAAGGGAAATCACCAGATTTTCTGCTGTGCATAGGAGATGATCGGTCAGATGAAGACATGTTTGAAAGCATTGCTCGTTCAGTTTCTAATCCAGCACTTCCGACCATATCACAAGTGTTTGCATGCACTGTTGGTCAGAAACCAAGTATGGCAAAATACTATTTGGAGGACACAAGTGAAGTCATCAAGTTGCTTGAAGGACTTGCTACTGCATCAGCACCCTCTCAGTCCAAAACATTCCAGGAATCATCATCACATGGAGGATCATCACTATAG	2616	0.5061	MLSRSCLGLLNLVSVDDYHALSRVPSLMAVTGGVTNESHNSREDRNNLGSDEAVSPVPQERRIIVANQLPIRATRDPNDGKRWSFEFDSDSLYLQLKDGFPSDVEVLYVGSLKADIDPSEQDEVSQLLLEKFRCVPTFLPSEIHNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLDSVLSLPTTAKRVEELREQYEGKVVILGVDDMDLFKGISLKFLALGQLLEVHEGLRGKVVLVQILNPARSRGKDIQDVKSESESIAMEINEKYGRPGYQPIVFVNGPVSTQEKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQGSVALDKALIGVVEDGGAEAARPKQSVIIVSEFIGCSPSLSGAIRVNPWNIEDVSEAMNSAITMPEAEKHLRHEKHYKYISSHDVAYWAKSFDQDLERACREHYRKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYRDTQSRLILLDYDGTMMPQASINKTPSSEVISVLNYLCSDPKNMVFIVSGRDKDCLSRWFSPCEKLGLSAEHGYFTRWSRDTAWETCGLTTDFDWKRMAEPVMAHYTEATDGSFIEHKESAVVWHHQEADPYFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVNKGIVVENLISSMRSEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSMAKYYLEDTSEVIKLLEGLATASAPSQSKTFQESSSHGGSSL*	872

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g2541	871	MobiDBLite	consensus disorder prediction	32	53	-	-
	Aev01g2541	871	CDD	GT20_TPS	61	554	IPR001830	GO:0003824\|GO:0005992
	Aev01g2541	871	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	856	IPR001830	GO:0003824\|GO:0005992
	Aev01g2541	871	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	61	558	-	-
	Aev01g2541	871	SUPERFAMILY	HAD-like	601	849	IPR036412	-
	Aev01g2541	871	Gene3D	Glycogen Phosphorylase B;	315	538	-	-
	Aev01g2541	871	Gene3D	-	600	718	IPR023214	-
	Aev01g2541	871	Gene3D	-	730	864	IPR023214	-
	Aev01g2541	871	Pfam	Glycosyltransferase family 20	61	554	IPR001830	GO:0003824\|GO:0005992
	Aev01g2541	871	Gene3D	Glycogen Phosphorylase B;	55	314	-	-
	Aev01g2541	871	TIGRFAM	T6PP: trehalose-phosphatase	600	849	IPR003337	GO:0003824\|GO:0005992
	Aev01g2541	871	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED	1	856	-	-
	Aev01g2541	871	Pfam	Trehalose-phosphatase	604	839	IPR003337	GO:0003824\|GO:0005992
	Aev01g2541	871	CDD	HAD_TPP	602	843	-	-
	Aev01g2541	871	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	602	806	IPR006379	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g2541	Aev-Chr1	28704537	28707396	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g2541	10	864	Trehalose Biosynthesis Gene Families	AT2G18700	67.986	0.0	1216

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g2541	K16055		-	gmx:100810498	1491.09