Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2536 ATGGCTAAGATGTTTGTACACAGAGGAGACACGTTTCTTCTGTCTCCATCAGAACAGCCACCACCGTTTTTTCTTCCTCACCCAAACCCACCTTTCCCTCCCACTACTGTTCGATCTGATAGCTTCTCCTTCAACAACAACGATAGGGCCTTGAAGGTTAGTCCTAGCATACTCCTTATAATCATAATTCTTGCTATTGTTTTCTTCGTTTCTGGCTTGCTCCACCTTCTTGTGAGGTTCCTGTGGAGGCCTCAGAGTAGGGACCCTGATGAGTTGGACAATGTCACTGCACTGCAAGGCCAGTTGCAGCAACTCTTCCACCTCCACGATGCTGGTGTTGACCAGTCCTTCATTGACACCCTCCCTGTTTTCCACTACAAGGCCATCATAGGATTGAAGAACCCTTTTGATTGTGCTGTTTGCTTGTGTGAGTTCGAACCAGAGGATAAGCTTAGATTGTTGCCCAAATGCAGCCATGCTTTTCACATGGAGTGTATTGACACATGGCTCTTGTCTCACTCTACTTGTCCACTTTGTAGAGCCACTTTGCTCCCTGATTTCTCTGCTAACAACACCTGTTCTCCTATTGTTCTTGTTCTGGAATCTGGGAGTGAGAGTTCTAGGGAGATTGTTCCTGAAAGAGACGGCTCTGTTATTGGAAGAACAAGCTCTGTCATAACATCCAATTCTCGCCTTGGTTGCCATGGAGACAGTGAATTCGGGTCAACCCGGATCGATTTGCAGCTCAAATCGGGTGAGTTGACTTCAAGTGACAACAACAACAACAATCCTGATCCAAGTTTAGGGGATGGGGTGGAAAAAGTGGTCACTGTTAAGCTTGGCAAGTTCAGGAGTGTGGATGGTGGTGGTGGTGGAGGAGAAGGAAGTAGTAGCACAAACAATGTGGATGCTAGGAGGTGCTTTTCAATGGGGTCATTTGCTTATGTTATGGATGAGAGTTCTTCACTTCAGGTACCGATAAGAACCCCTATCAAGAAGAAGCAATCAAGTAACAAGAAGTGTGTCCTGCCTTTGACACCAGGGCACAGGCCTGCAATGTCAGAATGTGACTGTGAATCCCGAAGAGATTTCAGATTTGCCGGGTTTGATGTAACTAGAGTTCTTGAGGATGCTCATGGGAGTGGAACTAGTCATGGTGATGGTGGTGGGGATGCTGCTATTAGAAGGAGCAGAAAAGAGAGCTTCTCTATATCCAAGATTTGGCTGAGAGGGAAGAAAGACAAGCCAAATGCAGTTGCAGATTCATCAAGAAGAGCGGTTTCGTTCCGGTTCCCGCCACAGCAGAGTGTTGTTGCTGCTGGTAGTGATGATGATTTGATGAAGGGTAATAAGAATGAGAAATTTGACACAAGGAGTACAATTTCTGAGATGGATATTGGGAAATGGGAGAATGGAGGAAGTGATTTTTGTGGTTATGATGAGGAAAGCCAGAGCTGTTACAGCATTGAATCTCAGTCTCAGGCTAGAGCACCTTCATTTGCTAGAAGGACTTTACTTTGGCTCACCGGAAGACAGAATAAGGTTGTTCATTCATTTTCTCCTCCTTCCAACCTCTAG 1578 0.4575 MAKMFVHRGDTFLLSPSEQPPPFFLPHPNPPFPPTTVRSDSFSFNNNDRALKVSPSILLIIIILAIVFFVSGLLHLLVRFLWRPQSRDPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFHYKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRATLLPDFSANNTCSPIVLVLESGSESSREIVPERDGSVIGRTSSVITSNSRLGCHGDSEFGSTRIDLQLKSGELTSSDNNNNNPDPSLGDGVEKVVTVKLGKFRSVDGGGGGGEGSSSTNNVDARRCFSMGSFAYVMDESSSLQVPIRTPIKKKQSSNKKCVLPLTPGHRPAMSECDCESRRDFRFAGFDVTRVLEDAHGSGTSHGDGGGDAAIRRSRKESFSISKIWLRGKKDKPNAVADSSRRAVSFRFPPQQSVVAAGSDDDLMKGNKNEKFDTRSTISEMDIGKWENGGSDFCGYDEESQSCYSIESQSQARAPSFARRTLLWLTGRQNKVVHSFSPPSNL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2536 525 SUPERFAMILY RING/U-box 117 189 - -
Aev01g2536 525 SMART ring_2 138 179 IPR001841 -
Aev01g2536 525 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 185 IPR013083 -
Aev01g2536 525 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Aev01g2536 525 Pfam Ring finger domain 137 180 IPR001841 -
Aev01g2536 525 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 13 421 - -
Aev01g2536 525 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 13 421 - -
Aev01g2536 525 CDD RING-H2_PA-TM-RING 137 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2536 Aev-Chr1 28672280 28673857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2536 72 517 C3H Transcription Factor Family AT2G18650 44.540 6.20e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2536 - - gmx:100797283 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2536 01 28672280 28673857 Aev01g2536 01 28672280 28673857 ECH