Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2510 ATGCCTGATTTGGGAAATTTGTCTCTCTCTGAGACACTTGCTCTTTCCCACCACCGCTCCAACGCCGTGGAGCCACCTGAGCTCACCAATTCCATTCACTCTGCACCGCTCAAAACCCTAGCTCCGGTTTCCAACGGCCTCGTTTCGATTCACTCTATGGCTGTACCGGTTGTTCAGCAAGACGATTCCCCCATTGGCAAAGCTGATGGAGCTGAAATTGAGGCTCCGACCGCGAAAGCAGCTAGTGGCAATTGCAAGGGTTTGGAGGATCGCATCAGAGATTGTTCGCTGAAGAGGAACAAATTGGGTTCCCAGGATGCCAAGCTTGAGCTCTCTTTTCCCTTCCTCGTTGGTGCTCCGAAGATGCCTGAATGCCTTGTTTGTTATCGTTCGGTATGCCCCGGAGAGGAGCTATCGTGTTCTGTTCGTGGCTGCGAAGGCATCTATCATATACAATGTGCAAAAAAAACTATGGGCGTCCCAAATCTGAAAAAATTCAAGTGCTCAAGACATGTATGCTTCGTTTGCAAAAAGTTAATGCCGTTGCGGTGTGTACGGTGCACTAATGCATTTCATCAAAAATGTGCCCCATGGCCAGAAGATGTGAGGTGTCTAAAAGATCGTCCTGGATATGCTGTTTGTTGGAGGCATCCTTCTGATTGGCGCCTGGATAGAAAGCCTGAAGCTTCAACAAGTAACATAGAGGAAATATTTAATCGCTTGCCACTTCCCTATGTCATTGAGGATTTCAAGTTTGAACTTACTTGGAAAAAAATGGACAGTAAGATCGAACAACCACCATATGTGCACATCAGGCGCAACATATACTTAATCAAGAAGCGTCACTACGCAGATGATGGTGCAGGGTGCACCAATTGCGGTTCTACATGCTGTGAGGATTGTGTGTGCAGGGTTCAATGTATAAGCTGCTCAAAATCGTGCGGCTGCTCAGAAAATTGCAGTAATCGGCCATTTCGCAAGGAGAAAAAGATTAAGCTTGTCAAGACTGAACATTGCGGATGGGGAGTAGAGGCAGCTGAATCCATCAATAAAGGCGAATTTATAGTTGAGTACATTGGAGAAGTTATTGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACAATGGTGCACAGAACTTCTACATGTGTGAGATTAAGAAAGACTTTACGATAGATGCAACTTTCAAAGGAAATTTGGCGCGATTTTTAAACCACAGCTGTAATCCCAACTGTGTTTTGGAAAAATGGCAAGTTGATGGTGAAACACGCGTTGGTGTATTTGCTTCCCGTTCAATAGAAGCAGGAGAGCCGTTAACATATGATTACAGATTTGTGCAATTTGGTACAGAGGTAAAATGCCAATGTGGTGCTACCAACTGTCGAGGCTTTCTGGGGACAAAAAAGAAAATTGTCAAGTTAGATACTTGCTGGGGCTCAAAACGTAAGAGAACTCCAGCTACTACTTATGCACCTGCATGTCCTAACAGATATGCACCTGTTTGA 1512 0.4478 MPDLGNLSLSETLALSHHRSNAVEPPELTNSIHSAPLKTLAPVSNGLVSIHSMAVPVVQQDDSPIGKADGAEIEAPTAKAASGNCKGLEDRIRDCSLKRNKLGSQDAKLELSFPFLVGAPKMPECLVCYRSVCPGEELSCSVRGCEGIYHIQCAKKTMGVPNLKKFKCSRHVCFVCKKLMPLRCVRCTNAFHQKCAPWPEDVRCLKDRPGYAVCWRHPSDWRLDRKPEASTSNIEEIFNRLPLPYVIEDFKFELTWKKMDSKIEQPPYVHIRRNIYLIKKRHYADDGAGCTNCGSTCCEDCVCRVQCISCSKSCGCSENCSNRPFRKEKKIKLVKTEHCGWGVEAAESINKGEFIVEYIGEVIDDALCEKRLWDMKYNGAQNFYMCEIKKDFTIDATFKGNLARFLNHSCNPNCVLEKWQVDGETRVGVFASRSIEAGEPLTYDYRFVQFGTEVKCQCGATNCRGFLGTKKKIVKLDTCWGSKRKRTPATTYAPACPNRYAPV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2510 503 ProSiteProfiles SET domain profile. 329 446 IPR001214 GO:0005515
Aev01g2510 503 ProSiteProfiles AWS domain profile. 286 329 IPR006560 GO:0005634|GO:0018024
Aev01g2510 503 ProSiteProfiles Post-SET domain profile. 452 468 IPR003616 -
Aev01g2510 503 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 77 491 - -
Aev01g2510 503 SUPERFAMILY SET domain 258 465 IPR046341 -
Aev01g2510 503 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 220 IPR013083 -
Aev01g2510 503 SMART set_7 329 452 IPR001214 GO:0005515
Aev01g2510 503 Gene3D SET domain 248 486 IPR046341 -
Aev01g2510 503 SMART PHD_3 124 172 IPR001965 -
Aev01g2510 503 SMART PHD_3 173 218 IPR001965 -
Aev01g2510 503 PANTHER SET DOMAIN PROTEINS 77 491 - -
Aev01g2510 503 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 499 IPR025787 -
Aev01g2510 503 Pfam SET domain 340 445 IPR001214 GO:0005515
Aev01g2510 503 SMART PostSET_3 452 468 IPR003616 -
Aev01g2510 503 CDD SET_ASHR3-like 330 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2510 Aev-Chr1 28509184 28514094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2510 310 467 C2H2 Transcription Factor Family AT2G23740 38.547 1.22e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev01g2510 SET 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2510 - - aprc:113859744 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2510 01 28509184 28514094 Aev01g2510 01 28509184 28514094 ECH