Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2509 ATGGGAAAAATATCATCACAGCAACAAATTTCCAAAAACAATGGAGGGAGTAACAATCTTAATGCAAGTACTACTAGTACTAAGGTGAAGCGAACAAGGAGAAGTGTACCTAGAGACTCTCCACCTCAACGAAGCTCAATATACAGAGGAGTCACTAGGCACCGATGGACAGGGCGATATGAAGCTCATTTGTGGGATAAGAATTGCTGGAATGAGTCTCAGAACAAAAAGGGACGACAAGTCTACCTTGGTGCTTATGACGATGAGGAAGCAGCAGCACATGCTTATGATCTAGCGGCATTGAAATACTGGGGTCAAGATACCATTCTTAATTTTCCGGTAACTAACTACCAGAATGAACTGAAGGAAATGGAGGGTCAGTCCAGGGAAGAGTATATCGGATCACTAAGAAGGAAAAGCAGTGGATTTTCTCGTGGAGTTTCTAAATATAGAGGTGTTGCAAGACATCATCAGAATGGAAGATGGGAGGCTCGGATTGGCAGAGTTTTTGGGAATAAATATCTTTATCTCGGAACTTATGCTACCCAAGAAGAAGCTGCCACGGCCTATGACATGGCTGCAATTGAATACCGTGGACTTAATGCTGTCACCAATTTTGACCTAAGCCGTTACATTAAATGGCTTAAGCCCAACAATAACAACAATAATAATAAGATTAACTTTAATCTCTCAGATGAAGTTATTAACCCTAATTCTAATGCCAATTTCATCCCTAACCTTAACAAAGAACAAGACTTTGGCTTCCTAAACAACCAAGAACCATTCAATAATATTGGAGACGATGCCACGTTGGTTCAGCCTAGACCGACTGGTGCCACGTCAGCCCTAGGACTTTTGCTCCAGTCGTCCAAATTCAAGGAAATGATGGAGATGACATCCGTGGCAAATCCGTCGATACCGTCGGAGTCCGAGCTATTGCCACAATGTACATTTCCGGATGACATCCAAACTTATTTTGAGTGTGAAGATTCCAACAAGTTTGAGGAAGGAGACGATGTCATATTCAATGAGCTCAACTCCTTTGTGCCTATGTTCCACTGTGACTTTGAGAATTGA 1077 0.4206 MGKISSQQQISKNNGGSNNLNASTTSTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGQDTILNFPVTNYQNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNNNKINFNLSDEVINPNSNANFIPNLNKEQDFGFLNNQEPFNNIGDDATLVQPRPTGATSALGLLLQSSKFKEMMEMTSVANPSIPSESELLPQCTFPDDIQTYFECEDSNKFEEGDDVIFNELNSFVPMFHCDFEN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2509 358 MobiDBLite consensus disorder prediction 1 30 - -
Aev01g2509 358 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 ProSiteProfiles AP2/ERF domain profile. 47 113 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 345 - -
Aev01g2509 358 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Aev01g2509 358 CDD AP2 46 115 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 Pfam AP2 domain 47 105 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 MobiDBLite consensus disorder prediction 1 49 - -
Aev01g2509 358 SUPERFAMILY DNA-binding domain 46 114 IPR016177 GO:0003677
Aev01g2509 358 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Aev01g2509 358 Gene3D AP2/ERF domain 47 115 IPR036955 GO:0003700|GO:0006355
Aev01g2509 358 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 345 - -
Aev01g2509 358 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Aev01g2509 358 SMART rav1_2 47 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2509 Aev-Chr1 28504953 28507903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2509 43 211 AP2-EREBP Transcription Factor Family AT5G57390 73.964 4.75e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aev01g2509 AP2 7.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2509 K09285 - gmx:100804555 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2509 01 28504953 28507903 Aev01g2509 01 28504953 28507903 ECH