Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2500 ATGGCAAAACCAGGGTGGTTTTTTATTTTGTTGGTGACATTCACCATTAGTTTTGCATCATCTTCTTCTTCTTCCGAGAACCCCTTTATTCAGCAAAAGCTTGATAAGGTTGGTTTGCTCCCAGGTCAAAACTTCAACATCAACTTCCAACACTATTCTGGGTATGTCAATGTTAATGATCAAGCTGGGAGGGCACTATTTTATTGGTTCTTTGAGGCTGATCTTGACCCTCAAACCAAACCCCTTGTTTTGTGGCTCAATGGAGGGCCTGGATGTTCATCCATTGCATATGGGGAAGCAGAGGAAATTGGTCCCTTTCATATAAATCCAGATGGAAAGTCCATATATCTGAATCCTTACTCTTGGAACCAAGTTGCCAACATTCTTTTTCTGGATTCTCCTGTTGGAGTTGGATTTTCGTATTCAAACACTACGTCTGACATTCTGGAAAATGGCGATAAGAGAGCTGCCGAGGATTCTCTAGTATTTCTGTTGAAGTGGTTTGAGCGTTTTCCACAATATAAAGGAAGGGACTTTTTCATCACTGGTGAAAGCTATGCCGGGCATTATGTTCCTCAACTTAGCCAAGTTATCATGAAGTACAACTCAGAAACAAAGAAAAATGCAATAAATCTGAAAGGTTACATGGTTGGAAATGCTCTTACTGATGATTACCATGACCATTTGGGGATTGCACAGTTTATGTGGTCAAGTGGTTTGATTTCTGATCAAACATACAAGCTATTGAACCAATGCGATTCCGAGTCATTCGTACATCCCTCAGATTCGTGTGGTCAGGTTTTTGAAAATGCTGATGCAGAGCTTGGCAACATTGATCCCTACAGTATCTTTACTTCTCTATGCCCCGGTAATGCCAGCCAATCAAATCAGCTGCTAAGAAGAAAGCATAGATTTGGCAGAGTCAGTGAAGGGTATGATCCTTGTACCGAGAGCCACTCTACCATATACTTCAATCTACCCGAGGTCCAAAATGCGCTTCATGTCGATCCAGATCATAGGCCTGAGAGATGGGTGACCTGCAGTGAAGAGGTAAATATCAACTGGAAGGATTGTCCTAGCACAGTGCTCGATGTTTATCGTGAACTTATTGGTTTGGGACTGAGGATATGGATGTTCAGTGGTGACACAGATTCCGTAATCCCGGTGACATCTACTCGGTACAGTATAGATGCTCTTAATCTTACAACTGTTCGCCCTTGGCGCGCGTGGTATGATGACGGGCAGGTTGGAGGGTGGACACAAGAATATGATGGACTCACCTTTGTAGCAGTAAGGGGTGCAGGGCATGAAGTTCCTCTGCATAGACCAAAACTTGCTCTTTCACTCATCAAAGCCTTCTTAACTGGAGCTTCCATGCCAAATCTGGAGCTAGTTAGTGACTCTTGA 1407 0.4314 MAKPGWFFILLVTFTISFASSSSSSENPFIQQKLDKVGLLPGQNFNINFQHYSGYVNVNDQAGRALFYWFFEADLDPQTKPLVLWLNGGPGCSSIAYGEAEEIGPFHINPDGKSIYLNPYSWNQVANILFLDSPVGVGFSYSNTTSDILENGDKRAAEDSLVFLLKWFERFPQYKGRDFFITGESYAGHYVPQLSQVIMKYNSETKKNAINLKGYMVGNALTDDYHDHLGIAQFMWSSGLISDQTYKLLNQCDSESFVHPSDSCGQVFENADAELGNIDPYSIFTSLCPGNASQSNQLLRRKHRFGRVSEGYDPCTESHSTIYFNLPEVQNALHVDPDHRPERWVTCSEEVNINWKDCPSTVLDVYRELIGLGLRIWMFSGDTDSVIPVTSTRYSIDALNLTTVRPWRAWYDDGQVGGWTQEYDGLTFVAVRGAGHEVPLHRPKLALSLIKAFLTGASMPNLELVSDS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2500 468 Gene3D - 315 353 - -
Aev01g2500 468 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 8 462 - -
Aev01g2500 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Aev01g2500 468 Gene3D - 362 456 - -
Aev01g2500 468 Pfam Serine carboxypeptidase 41 455 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 SUPERFAMILY alpha/beta-Hydrolases 40 459 IPR029058 -
Aev01g2500 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 462 IPR001563 GO:0004185|GO:0006508
Aev01g2500 468 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Aev01g2500 468 Gene3D alpha/beta hydrolase 32 289 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2500 Aev-Chr1 28451826 28454796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2500 343 459 Calmodulin-binding Proteins AT2G22960 24.576 6.30e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2500 K16297 - fve:101295740 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2500 01 28451826 28454796 Aev01g2500 01 28451826 28454796 ECH