Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2494 ATGGCTGCTATAACCAGCAGCACCACCACCTTCCCATTCCAGCTCCTCCACACTCGAACCACCACCACTACCACCAGATCCTCCGACTCCAAGCTCTTCGGTATTCCCTTTTCCAATCCCAATTCTATCAAATTTGATTCTCCGCTCTCCCTCTCCTTTACCCCCTCCACCTACGTTACCGCCCGCTATGGCGGTGGTGGCCGCTTTTCCGACTACGGCGACAGGAGGCGCCAGAATGACTCCGACGATGACCAAGCTCTCGACTTGTCCACTCTTAAGTCCAACACCGTGAGGCTTATTGATCAGAATCAGAATATGGTTGGAGTATTGTCTACCAGTCAGGCCATTCAAATGGCCGAAGATGCTGAACTTGACTTGGTAATAGTATCTCCAGATGCAGATCCTCCTGTTGTTAGAATAATGGATTACAGTAAATATAGATATGAACTGCAAAAAAAGAAAAGAGACCAGCAGAAGAAAAGTGCTGCTAATCGGATGGATTTGAAGGAGCTCAAAATGGGATACAACATAGATGAGCATGATTATTCCGTGCGTTTGAAAGCTGCACGGAAGTTCTTGAAAGATGGAGACAAGGTTAAGATCATAGTGAACCTTAAAGGTCGTGAAAATGAATTCAGGAATATTGCTATAGAGCTTGTCAGACGTTTCCAGACTGATGTAGGGGAGCTTGGAACAGAGGAGGCTAAAAACTTCCGTGACAGGAACATTTTCATAATTTTGGTTCCAAATAAAGCTGCTCTACAGAAAACCCAAGATCCACCAAAGAAAAAAGACAAGTCAGCAGCAGATGAAGTCTCCGTCATCTTTCACCACCAAGTCATGGAAGCCAGTGCTGGACTGGTAGCCGGTTCTCACAACCGTAACGAGCTCGTCGTCATTCATGGTCATGAAGAGCACAAGCCTTTGAAGAACTTGGATGGCCAAGTTTGTGAGATATGTGGCGATGACGTGGGACTCACGGTGGATGGAGACTTGTTTGTGGCATGCAATGAGTGTGGTTTTCCGGTGTGCCGGCCGTGCTATGAGTATGAAAGGAGGGAAGGGAGCCAACTTTGTCCACAGTGCAAGACCAGATACAAGCGTCTCAAAGGGAGCCCGAGGGTGGAGGGAGATGAAGATGAAGAGGATGTGGATGACATTGAACATGAATTCAACATCGATGACGAAAAGAACAAGCAGAACAACTCTGCAGAAGCCATGCTGCATGGGAAGATGAGCTATGGAAGAGGCCCTGAAGATGATGACAATGCTTATTTTCCACCTGTCATTGCCGGTGGTCGCTCTCGGCCTGTGAGTGGTGAGTTACCAGCAATAGCATCGCATGCTTATGGGGAGATGGTATCTTCATCATTGCATAAAAGAGTTCACCCTTATCCTGTGCTTGAATCTGCAAATGAAGGATGGGATGAAAAGAAAGATGGGTGGAAAGAAAGAATGGATGAATGGAAACTGCAGCAAGGAAATTTGGGGCCTGAACCTGATGAAGATCCAGATGCAGCCATGTTAGATGAAACAAGGCAACCACTATCAAGGAAGGTGCCAATAGCATCAAGCAAAGTGAATCCATATAGGATGGTGATCGTGGCGCGGCTTGTTATCCTTGCCTTTTTCCTCAGATACAGAATTATGAACCCGGTTCATGATGCATTGGGGCTATGGCTAACTTCTATTATCTGTGAAATCTGGTTTGCTTTTTCATGGATCCTTGATCAGTTCCCAAAATGGTTTCCAATTGATCGAGAGACCTATCTCGACCGTCTTTCAATCAGGTATGAGCGCGAAGGCGAACCCAATATGCTTGCTCCTGTAGATGTCTTTGTCAGTACTGTGGACCCTATGAAGGAACCTCCTCTGGTTACAGCAAACACTGTCCTTTCAATCTTGGCCATGGATTACCCTGTCGACAAGATATCATGCTACATTTCTGATGATGGTGCTTCAATGTGTACATTTGAAGCATTGTCAGAAACTGCAGAGTTTGCTAGGAAGTGGGTACCATTCTGCAAGAAATTTGCCATAGAACCAAGAGCACCTGAGATGTATTTCTGTGAGAAAATTGACTACCTAAAGGACAAAGTGCAACCAACCTTTGTCAAGGAACGTAGAGCTATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGATCAATGCACTTGTTGCAAAAGCTCAAAAGGTTCCTCCAGGAGGGTGGATCATGCAGGATGGGACACCATGGCCAGGAAACAACACTAAGGATCATCCTGGTATGATCCAAGTCTTCCTTGGTACCAGTGGAGGCCATGATACCGAAGGAAATGAGCTCCCTCGGCTTGTTTACGTCTCCAGAGAGAAAAGACCTGGTTTCCAGCACCACAAGAAAGCCGGTGCTATGAATTCTCTGATTCGGGTTTCTGCTGTGCTTACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCTGCCAGAGAGGCCATGTGCTTCTTGATGGACCCTCAAACTGGGAAGAAGATCTGCTATGTCCAATTTCCTCAAAGATTCGATGGCATCGATAGGCACGATCGTTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTATTCAGGGCCCTGTATATGTGGGAACAGGTTGTGTATTTAGGAGACAAGCTTTGTATGGATACAATCCTCCAAAGGGTCCTAAGCGTCCGAAAATGGTGAGCTGTGACTGCTGTCCATGTTTCGGAAAGCGCAAGAAGGCTAAGCATGCCAAGAATGATGCAATTGCAGAGTCTGCAAACCTAAAAGGAATGGATGATGACAAAGAGGTTTTGATGTCCCAAATGAACTTTGAGAAGAAATTTGGACAGTCATCAATTTTTGTGACTTCAACCTTGATGGAGGAAGGTGGTGTACCTCCCTCTTCAAGTCCAGCAAGCCAGCTTAAAGAAGCCATTCATGTAATCAGCTGTGGATATGAAGACAAAACTGAATGGGGAATTGAGCTAGGTTGGATCTATGGATCTATTACAGAGGATATTCTGACTGGTTTCAAGATGCATTGCCGAGGTTGGAGGTCAATTTACTGCATGCCTAAGAGGGCTGCATTCAAGGGTACTGCTCCCATCAACTTGTCTGATAGGCTTAACCAGGTGCTTCGTTGGGCACTTGGTTCCATCGAGATCTTCTTCAGTCGCCATTCCCCTTTATGGTATGGCTACAAGGAAGGGAAGCTAAAGTGGCTTGAGAGATTTGCCTACGCAAACACAACTGTCTACCCTTTCACATCCATTCCTCTAGTTGCATACTGTATTCTTCCTGCTGTTTGCTTACTCACTGACAAGTTCATTATGCCGCCGATAAGCACTTTTGCTGGTTTGTACTTCGTTGCTCTCTTCTCTTCAATCATTGCGACGGGCGTTCTTGAGTTGAAATGGAGTGGTGTGAGCATTGAGGAATGGTGGAGAAATGAGCAATTTTGGGTCATTGGTGGTGTGTCAGCACATCTTTTTGCTGTCATACAAGGTCTTCTGAAGGTTTTGGCTGGAATTGACACCAACTTCACTGTCACATCCAAGGCAGCAGATGATGAGGATTTTGGAGAGTTGTACACCTTTAAGTGGACTACTCTCCTAATTCCACCAACCACTATCTTGATAATCAACATTGTTGGGGTTGTTGCTGGAATCTCAGATGCCATTAACAATGGTTACCAATCATGGGGACCTCTGTTTGGGAAACTCTTCTTTTCCTTCTGGGTGATTGTCCATCTGTATCCATTCCTTAAAGGTTTGATGGGTCGGCAAAACCGCACGCCTACCATTGTTGTGATATGGTCAGTGCTATTGGCTTCTATCTTTTCCTTGCTCTGGGTAAGAATTGACCCATTTGTGCTCAAAACTAAGGGACCTGATACCAAGTTGTGTGGAATAAACTGCTGA 3957 0.4534 MAAITSSTTTFPFQLLHTRTTTTTTRSSDSKLFGIPFSNPNSIKFDSPLSLSFTPSTYVTARYGGGGRFSDYGDRRRQNDSDDDQALDLSTLKSNTVRLIDQNQNMVGVLSTSQAIQMAEDAELDLVIVSPDADPPVVRIMDYSKYRYELQKKKRDQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAARKFLKDGDKVKIIVNLKGRENEFRNIAIELVRRFQTDVGELGTEEAKNFRDRNIFIILVPNKAALQKTQDPPKKKDKSAADEVSVIFHHQVMEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFNIDDEKNKQNNSAEAMLHGKMSYGRGPEDDDNAYFPPVIAGGRSRPVSGELPAIASHAYGEMVSSSLHKRVHPYPVLESANEGWDEKKDGWKERMDEWKLQQGNLGPEPDEDPDAAMLDETRQPLSRKVPIASSKVNPYRMVIVARLVILAFFLRYRIMNPVHDALGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFAIEPRAPEMYFCEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGMIQVFLGTSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNSLIRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKICYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGKRKKAKHAKNDAIAESANLKGMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSRHSPLWYGYKEGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFAGLYFVALFSSIIATGVLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEDFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC* 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2494 1318 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 761 901 IPR029044 -
Aev01g2494 1318 CDD mRING-HC-C4C4_CesA_plant 315 365 - -
Aev01g2494 1318 TIGRFAM infC: translation initiation factor IF-3 92 251 IPR001288 GO:0003743|GO:0006413
Aev01g2494 1318 Pfam Cellulose synthase 610 1312 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aev01g2494 1318 SUPERFAMILY RING/U-box 301 387 - -
Aev01g2494 1318 Gene3D - 90 159 IPR036787 GO:0003743|GO:0006413
Aev01g2494 1318 ProSiteProfiles Zinc finger RING-type profile. 317 363 IPR001841 -
Aev01g2494 1318 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 281 1318 - -
Aev01g2494 1318 SUPERFAMILY Nucleotide-diphospho-sugar transferases 623 1090 IPR029044 -
Aev01g2494 1318 Coils Coil 708 728 - -
Aev01g2494 1318 Hamap Translation initiation factor IF-3 [infC]. 81 252 IPR001288 GO:0003743|GO:0006413
Aev01g2494 1318 Pfam Zinc-binding RING-finger 307 384 IPR027934 -
Aev01g2494 1318 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 166 251 IPR036788 GO:0006413
Aev01g2494 1318 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 92 159 IPR036787 GO:0003743|GO:0006413
Aev01g2494 1318 Pfam Translation initiation factor IF-3, N-terminal domain 93 157 IPR019814 GO:0003743|GO:0006413
Aev01g2494 1318 Pfam Translation initiation factor IF-3, C-terminal domain 167 250 IPR019815 GO:0006413
Aev01g2494 1318 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 281 1318 - -
Aev01g2494 1318 ProSitePatterns Initiation factor 3 signature. 139 152 IPR019813 GO:0003743|GO:0006413
Aev01g2494 1318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 300 390 IPR013083 -
Aev01g2494 1318 Gene3D - 162 258 IPR036788 GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2494 Aev-Chr1 28399254 28409046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2494 281 1318 Cell Wall Biosynthesis AT5G17420 85.467 0.0 1857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2494 K10999 - gmx:100815436 2007.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2494 01 28399254 28409046 Aev01g2494 01 28399254 28409046 ECH