Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2482 ATGGAGGGTCCTCCAGAAACCGAACTCTGCTCAGTATGCCGAGGAAACTTCACAACTCCATGCCAATCCAATTGCTCTCACTGGTTCTGCAGCAACTGCATCATGCTGATGTGGCACCACGGATCCATCCTCAATCTCATTACGTGTCCTCTCTGCCGCCGTCAGATCACCCTTCTCGTCCCATCCAAGGACTCACTCATTCAACGCAACCACGACCGCGAAGTCGCTGAGGTTCTCAATAAGATCCAAAAGTATAACCGTTTCTTCAGCGACCACAGTAGAGGCATCGTTCAGAGGGTACAGGATCTTCCGTTTCTGCTACGACACCTTCTGATTGAGCTAATGGCTCCTGAGAGGTCGCTTCCAATTGTGATTCGAGGTCGTATATATGTTGCGATGGGACTAACAGCTTTGTACATAATGAGGCCATTTGGGATCGTTTCAAAAAGGGCGTTTAGAGTGCTTGGAATATTCGATGATGTCCTGGTTGTGCTCATCCTTTGTATATTTGTTGCTTCTGTTTATCGATCAGAACTCTACCGTCGCCATGCAGCACGTTCATGA 564 0.4823 MEGPPETELCSVCRGNFTTPCQSNCSHWFCSNCIMLMWHHGSILNLITCPLCRRQITLLVPSKDSLIQRNHDREVAEVLNKIQKYNRFFSDHSRGIVQRVQDLPFLLRHLLIELMAPERSLPIVIRGRIYVAMGLTALYIMRPFGIVSKRAFRVLGIFDDVLVVLILCIFVASVYRSELYRRHAARS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2482 187 PANTHER BNAC07G13660D PROTEIN 1 185 - -
Aev01g2482 187 SUPERFAMILY RING/U-box 8 59 - -
Aev01g2482 187 PANTHER UNCHARACTERIZED 1 185 IPR038896 GO:0061630
Aev01g2482 187 SMART ring_2 10 52 IPR001841 -
Aev01g2482 187 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Aev01g2482 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 101 IPR013083 -
Aev01g2482 187 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Aev01g2482 187 Pfam Zinc finger, C3HC4 type (RING finger) 10 52 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2482 Aev-Chr1 28349408 28349971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2482 35 185 C3H Transcription Factor Family AT1G72175 53.642 2.08e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2482 K15707 - jre:109000985 236.884