Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2475 ATGGCTGAGGAGCACCGAAGCTCCGCCCAAGCTTTGCCTCAGGGAGCGCCGGAGGTTCACCGGGAAGGGAACGATCCGCAACGCGACGATGGGAACAGGCAAGAGCAGAAGCAAGAGAAAGCGCGAGAGGTTGAGGAGCGAGTCGGTGAGTCGCCGCGCGGCGCCACCGAGTCGCAGGGTTCTGAGAAAGCTCCTTGTACTGGGTCGAATTTGGAAACCCTAGCTGTTGAATCGAGTGGTTTGAACAATCGGAGCGATGATTTGCAGGGGAGCACTGATACTACGCCGAATACGGGTGTAAAAGCTGAAAGTAAGGAGACAGTCGGACATCCTGAAAAGGTAAACGTTGCAAGAGGAGCAGTAGAGGCACCTCCAACACAGACAGACAATCAGCCTCAGGTGTCTGTGTGTTCAACTCCATTGTCTGAACTGTCACCAACTTCTGTTACACAATCTTTATCATTGGTGTCTACAACTTTACCAAGACAGAAACTGACTCCTCTGAGGATTAATAATGCGATTGTGCCAGAAGTAGACAAAAAAAATCCTTCTGGTGGTAGAACTGCATCTGCTGTTTCTGTTGCAAGGACATCAGCTTCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTATCGCAGCTATTATAGGTGTACTCATTCAGATTGTTGTGCAAAGAAGATTGAGTGTTGTGATCATGTAGGTCATGTGATAGACACTGTTTATAAAAGTCAGCACAGTCATGATCCCCCACGGAAGATTAGTTCTACAAGGGAAAGTAAATTTGCTCCTCGTAATGAACCACCTACTGTCAAAAACAGAATTCCTGAACAACCGTGTATCAAAGATGTGAAGAACTCTGATCCATCCCCATCAGCAAAAGAACCTCTACAAGATGCACCTTGCCTTGCTGATAAGAATCGACGAAACTCGTCTGATATCAGTGATAATAATGGTAAAGTTGTTGTGAAGGAGGAGAATATACATGAGCCAGAGCTGAAAAAAAGAATGAAGAAAGATGACTTAACAGACACGGATTCTTCTGTAAAACCTGGAAAGAAACCCAAGTTGGTGGTACATGCAGCAGGGGATGTAGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCGAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTTCGAAAGCACATTGAGACTGCGGTTGATAACTCGAATGCTGTGATCATAACATACAAGGGTGTACACGACCACGACATGCCTGTCCCGAAAAAGCGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAACAACAGTTCGCAGCCAAAGAAACCCGACTCACCTCAAAAGCAGAAAACACCTACTAAATGGTCAGTGGACACTGAAGGAGAACTAACCGGGGAAGCAATGGACCTTGGAGGCGAAAAGGCAATGGAGTCAGCTAGAACACTTCTGAGCATAGGTTTCGAAATTAAACCTTGCTGA 1548 0.4709 MAEEHRSSAQALPQGAPEVHREGNDPQRDDGNRQEQKQEKAREVEERVGESPRGATESQGSEKAPCTGSNLETLAVESSGLNNRSDDLQGSTDTTPNTGVKAESKETVGHPEKVNVARGAVEAPPTQTDNQPQVSVCSTPLSELSPTSVTQSLSLVSTTLPRQKLTPLRINNAIVPEVDKKNPSGGRTASAVSVARTSASDGYNWRKYGQKQVKSPTGYRSYYRCTHSDCCAKKIECCDHVGHVIDTVYKSQHSHDPPRKISSTRESKFAPRNEPPTVKNRIPEQPCIKDVKNSDPSPSAKEPLQDAPCLADKNRRNSSDISDNNGKVVVKEENIHEPELKKRMKKDDLTDTDSSVKPGKKPKLVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSSQPKKPDSPQKQKTPTKWSVDTEGELTGEAMDLGGEKAMESARTLLSIGFEIKPC* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2475 515 MobiDBLite consensus disorder prediction 1 136 - -
Aev01g2475 515 SUPERFAMILY WRKY DNA-binding domain 371 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 ProSiteProfiles WRKY domain profile. 194 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 MobiDBLite consensus disorder prediction 250 360 - -
Aev01g2475 515 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 513 IPR044810 GO:0003700
Aev01g2475 515 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 SMART WRKY_cls 375 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 MobiDBLite consensus disorder prediction 432 487 - -
Aev01g2475 515 MobiDBLite consensus disorder prediction 316 360 - -
Aev01g2475 515 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 513 - -
Aev01g2475 515 MobiDBLite consensus disorder prediction 54 102 - -
Aev01g2475 515 MobiDBLite consensus disorder prediction 454 481 - -
Aev01g2475 515 Pfam WRKY DNA -binding domain 201 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 Pfam WRKY DNA -binding domain 377 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 MobiDBLite consensus disorder prediction 21 52 - -
Aev01g2475 515 ProSiteProfiles WRKY domain profile. 370 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 MobiDBLite consensus disorder prediction 250 267 - -
Aev01g2475 515 Gene3D WRKY domain 360 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 Gene3D WRKY domain 186 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2475 515 SUPERFAMILY WRKY DNA-binding domain 196 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2475 Aev-Chr1 28302713 28306024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2475 58 515 WRKY Transcription Factor Family AT4G30935 48.485 9.63e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev01g2475 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2475 - - gmx:100782194 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2475 01 28302713 28306024 Aev01g2475 01 28302713 28306024 ECH