Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2466 ATGGGAGAGACTATTAACAGAGGAGGAGGGAGTGAGGGTAACTGTTCATCGGCGTTGCTTCAGGGGAAGTACGAGCTTGGGAGGCTGCTAGGCCACGGAACATTCGCGAAGGTGTACCACGCGCGGAACGTGGAGAGTGGGAAGAGCGTGGCCATGAAGGTTGTTGGGAAGGAGAAGGTGATAAGGGTAGGGATGATGGAGCAGATCAAGAGGGAGATCTCCGTCATGAAGATGATGAAGCACCCTAACATCGTCGCGCTTCACGAGGTCATGGCCACCAAAACCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCAACAAGATCGCCACTAAAGGCCGATTGAGGGAAGATCTCGCCAGATTCTACTTCCAGCAATTGATCTCCGCCGTCGATTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCCGAGAATCTCCTCCTCGACGAGCACGGTAACCTCAAGGTCTCCGATTTCGGCCTCAGCACCTTCTCGGATTACCTCCGCCACGACGGCCTCCTCCACACTACGTGCGGAACTCCGGCGTACGTCTCGCCGGAGGTCATCGCGAAAAAAGGCTACGACGGCGCTAAGGCTGATATATGGTCCTGCGGTGTCATCCTCTACGTTCTCCTGGCTGGGTTCTTACCCTTTCAGGATGACAACTTGGTTGCTATGTATAAGAAAATCTACAGAGGCGATTTCAAATGTCCACCGTGGTTTTCCAGTGAAGCTAGGAGGCTGATAACGAAGCTCCTCGACCCGAACCCGAATAGCCGAATCAGCATATCGAAGATCATGGAGTCGCCGTGGTTCAAGAAATCGGTTCCGAAGAGCATGGTGAGGGAGACGAAGGAGGAGGAAGAAGAGGGGTTTGATGAGAAAGAGAAAATGAAGCAGCCCGCAACGATGAACGCGTTTCACATAATAGGGTTATCGGAAGGGTTCGATTTGTCGAGGCTGTTCGAGGAGAAGAAGAGAGAGGAGAGGGAGGAGATGAGGTTCGCGACGGCGGGGACGGCGAGCAGCGTGATATCGAGGCTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGGAGCAATGACGAGAGCAAAGTGAGGCTTCAGGGGACACAGCAAGGGAGGAAAGGGAAGCTTGCTATCGCCGCCGATATATACGCCGTGACGCCCTCGTTTCTGGTGGTTGAGGTTAAGAAGGATAAAGGTGACACCTTGGAGTATAACCAGTTCTGCAGCAAGGAGCTTCGTCCTGCACTCAAAGATATCTTATGGAGTACTGCTGCTCCACCTGAGAATTCCACACCTGCTTGA 1338 0.5426 MGETINRGGGSEGNCSSALLQGKYELGRLLGHGTFAKVYHARNVESGKSVAMKVVGKEKVIRVGMMEQIKREISVMKMMKHPNIVALHEVMATKTKIYIAMELVRGGELFNKIATKGRLREDLARFYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLSTFSDYLRHDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRISISKIMESPWFKKSVPKSMVRETKEEEEEGFDEKEKMKQPATMNAFHIIGLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRSNDESKVRLQGTQQGRKGKLAIAADIYAVTPSFLVVEVKKDKGDTLEYNQFCSKELRPALKDILWSTAAPPENSTPA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2466 445 CDD CIPK_C 312 429 - -
Aev01g2466 445 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2466 445 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2466 445 ProSitePatterns Protein kinases ATP-binding region signature. 30 57 IPR017441 GO:0005524
Aev01g2466 445 PANTHER - 15 442 - -
Aev01g2466 445 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 442 - -
Aev01g2466 445 Gene3D Transferase(Phosphotransferase) domain 1 104 307 - -
Aev01g2466 445 Gene3D Kinase associated domain 1, KA1 308 434 - -
Aev01g2466 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Aev01g2466 445 SUPERFAMILY Protein kinase-like (PK-like) 21 287 IPR011009 -
Aev01g2466 445 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Aev01g2466 445 Gene3D Phosphorylase Kinase; domain 1 15 103 - -
Aev01g2466 445 CDD STKc_SnRK3 23 278 - -
Aev01g2466 445 Pfam NAF domain 308 367 IPR004041 GO:0007165
Aev01g2466 445 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2466 Aev-Chr1 28228875 28230212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2466 10 445 CBL-interacting serine-threonine protein kinases AT4G30960 72.851 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aev01g2466 Pkinase 8.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2466 - K07198 var:108321114 689.108