Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2463 ATGCAACCTTGTAGCAGGGAAATGCAAGGCCTCAACTCCCTCTTCGATAACAACACGCCGCAGCAGATCCAAATGAATAACCTCGCCGACCACATCGACCCAATTCCAGCTTCTGCTTCTCACGACGATTTCCTCAAGCACATGCTCTCCACACTCCCCAATTCTTCCTCCTTCTGGCCAGATCACCTTAACCCTCCTTCCAATTCCGATGAAACACCTCCCTCTCCTCTCCACAATGTCGCCTCCTTCACTTACGACGACCACGCTTCCCTCGCTTCCAAGTTCCGTAACCACCAGATCACTCCCACCTCATCATCCGGAAAGCCCACTTCCCCCGCCGCCGCTCTCATGCTCCACCACCACCTTCTCATGTCCAGAGGCGCAGATTCCGCCCTCCTCCAGATGCCCTTGTCCTTGCCAGGTGCCGGAAACGACGTCGTTGACGGCTCATCATCCTTCAAATCTCCCAATCCCGCTGGTGAGGGTTCCGTTCAAGCTCTCTTCAACGGATTCACCGGATCTCTACAGGGAACTGCCATAGCCTCCAACCAGACTCACCATTTTCAGCATCCACAGGGTCAGGGAGGTTCGAATCCGATGCAGGGGCAGAGTTTTGGAGGTTCAGGCGGCGGAGGAAACCCGGGTCAGCCGAAGCAGAGGGTTAGGGCCAGGAGAGGTCAAGCTACGGACCCACACAGCATCGCTGAGAGGTTACGAAGGGAAAGAATCGCGGAGAGAATGAAGGCATTACAGGAACTAGTTCCCAATGCCAACAAGACAGACAAGGCCTCCATGCTAGATGAGATCATTGACTATGTGAAGTTCTTGCAGCTCCAAGTCAAGGTTTTGAGCATGAGCAGATTGGGAGGTGCAGCTGCAGTCGCTCCCCTTGTTGCTGATATAACCTCTGAGGGAGCCGGTGGTGACTGCCTCCAAGCCAACGGTGGCCGCAACCAAACGACGCCGTCTTCCTCCTCCAACGACAACAGCCTCACCATGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTTCAGGGCAAAGGCCTCTGCCTCATGCCCATTTCACTCGCCACCGCTATCTCAACCGCCACGTGTCATGCCAGGAACCCTTTGATCAACAACAACCAGGTCATTGCATCCAACGGTGCTGATGGACCCTCCTCTCCTGGAATGTCCGTCTTGACTGTGCAGTCCGGTACTTTGGGTAACGGTGACGCCGTTAAAGATGCAGCCTCCGTTTCGAAGCCGTGA 1278 0.5548 MQPCSREMQGLNSLFDNNTPQQIQMNNLADHIDPIPASASHDDFLKHMLSTLPNSSSFWPDHLNPPSNSDETPPSPLHNVASFTYDDHASLASKFRNHQITPTSSSGKPTSPAAALMLHHHLLMSRGADSALLQMPLSLPGAGNDVVDGSSSFKSPNPAGEGSVQALFNGFTGSLQGTAIASNQTHHFQHPQGQGGSNPMQGQSFGGSGGGGNPGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADITSEGAGGDCLQANGGRNQTTPSSSSNDNSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHARNPLINNNQVIASNGADGPSSPGMSVLTVQSGTLGNGDAVKDAASVSKP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2463 425 MobiDBLite consensus disorder prediction 223 238 - -
Aev01g2463 425 MobiDBLite consensus disorder prediction 186 210 - -
Aev01g2463 425 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 383 - -
Aev01g2463 425 Pfam Helix-loop-helix DNA-binding domain 232 277 IPR011598 GO:0046983
Aev01g2463 425 SMART finulus 233 282 IPR011598 GO:0046983
Aev01g2463 425 Gene3D - 222 284 IPR036638 GO:0046983
Aev01g2463 425 MobiDBLite consensus disorder prediction 186 238 - -
Aev01g2463 425 MobiDBLite consensus disorder prediction 392 425 - -
Aev01g2463 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 227 276 IPR011598 GO:0046983
Aev01g2463 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 225 287 IPR036638 GO:0046983
Aev01g2463 425 MobiDBLite consensus disorder prediction 392 411 - -
Aev01g2463 425 MobiDBLite consensus disorder prediction 60 80 - -
Aev01g2463 425 PANTHER TRANSCRIPTION FACTOR BHLH69 32 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2463 Aev-Chr1 28205067 28208158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2463 37 425 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 47.837 4.19e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2463 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2463 - - jre:109012891 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2463 01 28205067 28208158 Aev01g2463 01 28205067 28208158 ECH