Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2452 ATGATTGGGAAGAACCAAAGGGGTGAACATGGGGCCAATAAAGATTGCTTCTCAGACCTTTTTCCTGTGGGCATGCGTGTTCTTGCTGTTGATGATGATCAAGTTTGTCTCAAAGTTTTGGAGAAGATGCTTATGGAATGCCGTTATCATGTTACTACAACTACTCAGTCAACCAAGGCACTAGAGATGTTGAGGGAAGACAAGAATAAGTTTGACCTTGTTATTAGTGATGTGAACATGCCAGACATGGATGGCTTTAAGCTTCTTGAAATAGTGGGACTTGAAATGGACCTACCTGTCATTATGTTGTCAGCACACAAGGATATAAATCTGGTGAAGAAGGGTGTTTTGCATGGAGCGTGCGACTATTTGCTGAAACCTTGTCGAATGGAGGAACTGCGGAACATATGGCAGCATGTATTCAGAAGGAAGATTGATTTCAAGGAACTGAACAAGGCCTCCATTATTGAGGACAAGGTCTGCAATATGGTTAGGGAGGATAGTCAAGGAATTGCTTCAGAAAATAATGCTGACGATAGTAAGAAACGAGGTAAAAGAGTGAAGGAAGAAGGCGGGGAAGAGGGGGAGGAGGAAGATGATGATGAGAACGATCAAGAGGACGAGGAACATTCAACTCGGAAGAAACCTCGCTTGCTTTGGGTTAATGAATTGCATAGAAAATTTGTTGCTGCAGTTAATCAACTTGGCCTTGAGAGGGCTGTTCCTAAGAAAATACTTGACTTGATGAATGTTGAAGGACTCACAAGGGAAAATGTGGCTAGTCATCTTCAGAAATACAGACTAGGTCTTAGAAAGGCAGCTGAGCAAGCTAGCACGGTTGGATTAGGTAGTAGTGATCCTTACCTGCAGATGTCTTCACTTGATCCTTATTCATCTGGTTCAGGAAGATTCTCATGTACCGCGCCACCATCTCATGTATCTGCTGGAGTCTTTTCTAATCTGAATTCCTCACCCAGCTTCAACATGAGAGGAATGAGTTCTTCTGTGATGGTCCGGCACGATCAGTCTCAAACCATGAATGACTCCTTAAAAGCACATGGAAGCATCCATCCATCCATGTTCTCTGCAAATCAAAGCACAAATTTGTTACAGGGAATTCCATCATCAATTGAAGTCAACCAGTTTCAGCAGAGCAACTATAGAGCCGGTATCAGGCAGCCTAGGCCAACCGAAAGTTCAAGTATATTCACAGTTCCCTCTGTCTACACAAAGAGTAGAACAGCATTTGGTAATGGAAATAGTTATCAATCTTGCTTCTCAAGTAACCATATGCTGTTTCAAGGAAACTCTCCATCACCACATAATTCAGTAGCATTTAGAAACCACTCTCCCCTTGGACCTGTGAAAACTGACTCTCCTGACAGAGGCGTCTGTGGTGCATCCAACACAAGCATGCAGAATGCAGCTCAGTTATCCAAATTTTATTCCAACTCTTTGCCGCCGACTCAAGCTTTCAACAATGGTCAATTGCCTCAAAATAGCTTCAAGTTTTCCTCCCCCACTTCTCAGATTGGGATCATTCCATTTGAGGAATCAAGAGGTGGGATTCAATTCCATGAGGGCTTAATTGGGAGTATTGTACAAGCATCATACAACAACCTTCAACAAAGTTGCCAACAACAACATAAGCCGGATTACAACCAAAACAAGAACCAAGCCTTCAATTCATTGGTTTCTTCTAATGGAGGCACTAGTTCCTTGGGGCATAATTCAAACCAAAATAACACTAATGAGATGAATGAATCTTTGGATGGCCAGCAAAATGAAGCTGCTCCACCAACCAACCAGTGCCCTAAACTTGAGAAACTATGTTCAGATGCAAGAATGAAGTCAAATGATGATGCTTGCAATTTGGAGGGAATGGAGTCACAGGAAGGAGTCAATGAGAGTGACTTTGAGTCTTTGGATTACATATTAGGAGACATGGTCAAACCGGAGGAGCAACAAGGGATTCTATTCATGAATGAAGAATTGGTATTTGATGCTGACCCTGTTGAATCATGTGTCTGA 2031 0.4244 MIGKNQRGEHGANKDCFSDLFPVGMRVLAVDDDQVCLKVLEKMLMECRYHVTTTTQSTKALEMLREDKNKFDLVISDVNMPDMDGFKLLEIVGLEMDLPVIMLSAHKDINLVKKGVLHGACDYLLKPCRMEELRNIWQHVFRRKIDFKELNKASIIEDKVCNMVREDSQGIASENNADDSKKRGKRVKEEGGEEGEEEDDDENDQEDEEHSTRKKPRLLWVNELHRKFVAAVNQLGLERAVPKKILDLMNVEGLTRENVASHLQKYRLGLRKAAEQASTVGLGSSDPYLQMSSLDPYSSGSGRFSCTAPPSHVSAGVFSNLNSSPSFNMRGMSSSVMVRHDQSQTMNDSLKAHGSIHPSMFSANQSTNLLQGIPSSIEVNQFQQSNYRAGIRQPRPTESSSIFTVPSVYTKSRTAFGNGNSYQSCFSSNHMLFQGNSPSPHNSVAFRNHSPLGPVKTDSPDRGVCGASNTSMQNAAQLSKFYSNSLPPTQAFNNGQLPQNSFKFSSPTSQIGIIPFEESRGGIQFHEGLIGSIVQASYNNLQQSCQQQHKPDYNQNKNQAFNSLVSSNGGTSSLGHNSNQNNTNEMNESLDGQQNEAAPPTNQCPKLEKLCSDARMKSNDDACNLEGMESQEGVNESDFESLDYILGDMVKPEEQQGILFMNEELVFDADPVESCV* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2452 676 CDD REC_typeB_ARR-like 27 141 - -
Aev01g2452 676 MobiDBLite consensus disorder prediction 176 192 - -
Aev01g2452 676 Gene3D - 24 155 - -
Aev01g2452 676 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 215 268 IPR006447 GO:0003677
Aev01g2452 676 MobiDBLite consensus disorder prediction 169 213 - -
Aev01g2452 676 MobiDBLite consensus disorder prediction 545 605 - -
Aev01g2452 676 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Aev01g2452 676 Gene3D - 211 273 - -
Aev01g2452 676 SUPERFAMILY CheY-like 24 150 IPR011006 -
Aev01g2452 676 MobiDBLite consensus disorder prediction 545 601 - -
Aev01g2452 676 Pfam Response regulator receiver domain 27 136 IPR001789 GO:0000160
Aev01g2452 676 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 271 IPR017930 -
Aev01g2452 676 SMART REC_2 25 137 IPR001789 GO:0000160
Aev01g2452 676 SUPERFAMILY Homeodomain-like 212 272 IPR009057 -
Aev01g2452 676 Pfam Myb-like DNA-binding domain 220 267 IPR001005 -
Aev01g2452 676 PIRSF RR_ARR_type-B 3 675 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aev01g2452 676 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 653 IPR045279 GO:0009736
Aev01g2452 676 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2452 Aev-Chr1 28129998 28132963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2452 19 389 Response Regulator Gene Family AT2G25180 51.309 1.02e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev01g2452 Response_reg 5.2e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2452 K14491 - gmx:100776075 624.78