Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2440 ATGTCAGGGTGGGACGAAGGAGCAGTCTACTACAGCGACCAAGCTCACTCCTGGGACGACGGCGCCAACGGCCGCTCTGGCGACCCCTCCGCCGCCGCATCCAACCACTCTGTCCTGCAGAAGTTCAAAGAGTTCATCCGAAACTATGCTAAATCCGAGTCCAGAAACGTCTTCCATTACAGAGAGAGCCTCCTGCACAACCCTAAGTTCCTCCTCATCGACATCGCTGACCTTGAGGAATTCGACCCCGACCTTTCCTCTAAGCTCCACTCTTCCCCCGCTGATTTCTTGCCACTCTTTGAGTCCGCGGCGGCGCAGGTTTTGGTGAGTCTGAAGACGAAAGTTCCTGGTGATACCGGCGCTATGGAAGATCCGGTGACCGGTGATGTTCAGGTTCTGCTTACTTCGAAGGTGGATCCCGTGTCGATGAGATCGCTCGGGGCTCAACACATTTCAAAGCTTGTTAAGATTGCTGGGATTACCATAGCCGCGTCAAGGACCAAGGCAAAGGCAACTTATGTTAACCTTATTTGTAAGAATTGCAACAAAGGGAAGATAGTTCCTTGCAGGCCAGGACTTGGAGGAGCAATTATTCCTCGCTCGTGTGATCATGTTCCTCAGCCTGGAGAAGAACCGTGTCCAATGGATCCATGGCTAGTGGTTCCTGACAAGAGCAAGTACGTTGATCAACAAACCTTGAAACTGCAAGAAAACCCAGAGGACGTTCCAACCGGAGAGCTTCCTAGAAACCTGCTTCTCTCTGTTGATCGTCATCTAGTTCAAACAGTGGTACCTGGCTCAAGATTGGCAATCACTGGAATCTACAGTATTTACCAGGGTTCCAACTCTTCATCATCTCAAAAAGGAGCGGTTGCAGTCAGACAGCCTTATATTAGGGTGGTAGGAATTGAAGAAGCAAATGAGGCCAAGTCTCGAGGTCCAGCTGCATTTACACCAGAAGAGATAGAAGAGTTCAAAAAGTTTGCTGCTGAACCTGATGCATACAAAAATATATGCTCTAAGATTGCTCCGTCAATATATGGGCATGATGATGTCAAGAAGGCTGTGGCCTGTCTTCTTTTTGGTGGCTCAAGAAAGCATTTACCAGATGGAGTAAAGTTAAGAGGTGATATCAATGTCTTGCTTCTTGGGGATCCATCTACTGCAAAATCTCAGTTCCTCAAGTTTGTTGAGAAGACAGCACCTATCGCTGTTTATACTTCTGGGAAAGGCTCATCTGCTGCAGGTCTTACAGCTTCCGTAATCAGAGATAGCAGCACTCGTGAGTTTTATCTTGAAGGAGGGGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGATGAATTTGATAAGATGAGACCTGAAGATAGGGTTGCCATCCATGAAGCCATGGAACAACAAACTATATCCATAGCCAAAGCAGGAATAACAACCGTTCTTAATTCGAGGACTTCTGTTCTTGCTGCTGCTAACCCTCCATCAGGACGTTATGATGATCTCAAGACTGCACAGGATAATATTGATTTGCAGACAACTATTCTCTCTAGGTTTGATTTAATCTTCATTGTGAAAGATATCAGAAAGTACGATCAGGATAAGATCATAGCCAGTCACATCATAAGGGTTCATGCATCTGCTGGTGCAACCCCTGGTGAGAATAAGGTTTCTAACGAAGAGAATTGGCTGAAGAGGTATTTACAATATTGTCGAACTGAATGCCACCCTCGTCTCTCGGAGTCTGCAGCAGCACATCTGCAGAATGCTTATGTAAAAATCAGACAGGACATGAGGCAGCAAGCGAATGAAACTGGAGAAGCTGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTGTTAGGTTGAGTGAGGCACTTGCTAAGATGAAACTAGCTTATCTTGCTACGGAGGAGCATGTGCAAGAAGCAATAAGGCTTTTCACCGTGTCTACAATGGATGCAGCGCGGTCTGGAATAAACCAACAAATAAATCCCACACCCGAAACTGCAAATGAAATACAGCAAGCAGAAACGCAGATAAAGAGAAGAATCGGGATCGGAAACCACATATCAGAAAGAAGGCTGATTGATGACCTCTGCAGAATGGGAATGAATGAATCCATTGTGAGAAGAGCTCTTGTAATCATGCACCAGAGAGACGAAATACAGTACAAGCGAGAAAGGCGTGTTATATGCAGGAAAGTATAA 2211 0.4618 MSGWDEGAVYYSDQAHSWDDGANGRSGDPSAAASNHSVLQKFKEFIRNYAKSESRNVFHYRESLLHNPKFLLIDIADLEEFDPDLSSKLHSSPADFLPLFESAAAQVLVSLKTKVPGDTGAMEDPVTGDVQVLLTSKVDPVSMRSLGAQHISKLVKIAGITIAASRTKAKATYVNLICKNCNKGKIVPCRPGLGGAIIPRSCDHVPQPGEEPCPMDPWLVVPDKSKYVDQQTLKLQENPEDVPTGELPRNLLLSVDRHLVQTVVPGSRLAITGIYSIYQGSNSSSSQKGAVAVRQPYIRVVGIEEANEAKSRGPAAFTPEEIEEFKKFAAEPDAYKNICSKIAPSIYGHDDVKKAVACLLFGGSRKHLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIRDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRKYDQDKIIASHIIRVHASAGATPGENKVSNEENWLKRYLQYCRTECHPRLSESAAAHLQNAYVKIRQDMRQQANETGEAAAIPITVRQLEAIVRLSEALAKMKLAYLATEEHVQEAIRLFTVSTMDAARSGINQQINPTPETANEIQQAETQIKRRIGIGNHISERRLIDDLCRMGMNESIVRRALVIMHQRDEIQYKRERRVICRKV* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2440 736 Pfam MCM N-terminal domain 40 118 IPR027925 -
Aev01g2440 736 Pfam MCM OB domain 143 278 IPR033762 -
Aev01g2440 736 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 64 677 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 Gene3D - 315 671 IPR027417 -
Aev01g2440 736 Pfam MCM AAA-lid domain 562 651 IPR041562 -
Aev01g2440 736 Gene3D - 170 228 - -
Aev01g2440 736 Pfam MCM P-loop domain 322 544 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 ProSitePatterns MCM family signature. 443 451 IPR018525 GO:0003677|GO:0005524|GO:0006260
Aev01g2440 736 Gene3D - 34 120 - -
Aev01g2440 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 344 653 IPR027417 -
Aev01g2440 736 Gene3D - 143 278 IPR012340 -
Aev01g2440 736 ProSiteProfiles MCM family domain profile. 334 540 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 CDD MCM5 337 651 - -
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 463 476 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 487 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 375 390 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 514 522 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 435 449 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aev01g2440 736 PANTHER DNA REPLICATION LICENSING FACTOR MCM5 64 677 - -
Aev01g2440 736 Coils Coil 583 603 - -
Aev01g2440 736 SUPERFAMILY Nucleic acid-binding proteins 41 300 IPR012340 -
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 144 159 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 294 306 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 570 585 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 646 663 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aev01g2440 736 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 170 182 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Aev01g2440 736 SMART mcm 139 653 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2440 Aev-Chr1 28071814 28077013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2440 1 735 Core DNA Replication Machinery Family AT2G07690 76.327 0.0 1154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2440 K02209 - jre:109019482 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2440 01 28071814 28077013 Aev01g2440 01 28071814 28077013 ECH