Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2431 ATGGCTTTTCATCAGGAGCATCTGCAACACGAGATAGCTTTCCAGCGGTTCAACGAGGAGCAACAACTGTCAGAGACGAATAGGGACATGCAGCAGCAGAGGGTAGTAGTGCCTCCAACATCATGGCTCAACAACAATAATAATAGCAGCCACCTTCGGCAACAGAATTTCCTGCACCAGCTACAGCCGGAGACGGCGGAGAAGAGCATGGATCGGAGCAGGAGCGAAGGTACCAATTGCGAATCGGATGATTTGAGGGAATACAAGGCCGATATTTTGGGGCATCCACTTTACGAGCAGCTCTTGTCGGCTCATGTTTCCTGCCTCCGGATTGCAACGCCCGTCGACCAGCTTCCTAGGATCGACGCCCAGTTGCAGCAGTCGCAGCGCGTGCTCGATAAGTACTCTGCACTTGCAAACAACGCTACTGTCATCGATGACAAGGAGCTTGATCACTTCATGACGAATTATGTGCTGCTACTGTGTGCCTTCAAAGAACAGTTGCAGCAACACGTCCGCGTCCATGCAATGGAAGCAGTGGTGGCTTGTTGGGATCTCGAGCAGTCTCTACAAAGCTTGACCGGTGTGTCTCCGGGAGAGGGAACGGGTGCGACGATGTCGGAAGATGAAGATGAACAAGTAGGGGAGATAAGCAACATAAACTTATACGAAGGAGGGGTTGATGGTGGAGGAGGGGTTGATAGTCTGGGTTTTGGGCCTCTAGTGCCCACTGAGACTGAAAGGTCATTGATGGAGCGAGTGAGGCATGAGTTGAAGCATGAGCTCAAACAGGGCTACAAGGAGAAGATTGTTGACATCAGAGAAGAAATCCTCCGAAAGAGGCGAGCCGGCAAGCTCCCTGGGGACACCACCTCCCTTTTGAAAGCCTGGTGGCAGTCTCACTCTAAATGGCCTTACCCTACTGAGGAAGACAAGGCTAGGTTGGTGCAGGAAACAGGGTTGCAATTAAAGCAGATAAACAACTGGTTCATAAATCAAAGGAAAAGGAACTGGCATACTAACCCCTCTTCCTCTACCTCCTCCAAAACCAAGCGCAAGAGTGCGGGCGAAAGCAGTAGCCAGAGCTTCATGTGA 1095 0.5123 MAFHQEHLQHEIAFQRFNEEQQLSETNRDMQQQRVVVPPTSWLNNNNNSSHLRQQNFLHQLQPETAEKSMDRSRSEGTNCESDDLREYKADILGHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVLDKYSALANNATVIDDKELDHFMTNYVLLLCAFKEQLQQHVRVHAMEAVVACWDLEQSLQSLTGVSPGEGTGATMSEDEDEQVGEISNINLYEGGVDGGGGVDSLGFGPLVPTETERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPSSSTSSKTKRKSAGESSSQSFM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2431 364 Pfam KNOX1 domain 88 129 IPR005540 GO:0003677|GO:0005634
Aev01g2431 364 Pfam KNOX2 domain 145 194 IPR005541 GO:0003677|GO:0005634
Aev01g2431 364 Pfam ELK domain 257 278 IPR005539 GO:0003677
Aev01g2431 364 Gene3D - 283 360 - -
Aev01g2431 364 Pfam Homeobox KN domain 297 336 IPR008422 GO:0003677|GO:0006355
Aev01g2431 364 ProSiteProfiles 'Homeobox' domain profile. 277 340 IPR001356 GO:0003677
Aev01g2431 364 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 28 358 - -
Aev01g2431 364 SMART HOX_1 279 344 IPR001356 GO:0003677
Aev01g2431 364 SMART KNOX1_2 86 130 IPR005540 GO:0003677|GO:0005634
Aev01g2431 364 SUPERFAMILY Homeodomain-like 279 344 IPR009057 -
Aev01g2431 364 SMART KNOX2_2 140 195 IPR005541 GO:0003677|GO:0005634
Aev01g2431 364 SMART ELK_2 257 278 IPR005539 GO:0003677
Aev01g2431 364 MobiDBLite consensus disorder prediction 334 364 - -
Aev01g2431 364 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 358 - -
Aev01g2431 364 CDD homeodomain 280 341 IPR001356 GO:0003677
Aev01g2431 364 ProSiteProfiles ELK domain profile. 257 277 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2431 Aev-Chr1 28013472 28018173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2431 88 361 Homeobox Transcription Factor Family AT5G11060 81.588 2.22e-162 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Aev01g2431 KNOX2 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2431 - - gmx:100803673 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2431 01 28013472 28018173 Aev01g2431 01 28013472 28018173 ECH