Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2424 ATGGGTTCGGCAAATAGTAGACTTGGCTCTCGTCCTCATAGTTCCCGGGTCAACCGTAACACACGCTTCAGACTCTCTTCTCTTCTCTGTGGTGGTGCTTCTTCCACCTCTCGCTCTACCCATCAGATGGAAGAATATCCATCTGAACTCCAGGTAGATTCGACTACAGAATTTGGTAAAGGAATGCCGAAAGTTGCTGAGGAGTCATCCTTATCCTGTACAGAAGCTAGAATTGAAGCTGCTACCTCATCTGATACTAGAACTGAGTCCTATGGCAATTCTACTGGTGAAGGTTCTTCCATAAATGTTGCAACACGTAGTCAGAGGAAGTGCTTGTCTGAATGTAAGGAGCTAGTCCCTCCTTATGAGGTAAGTGCTGGTCATAGTCGTCATGAATCATTTAGGGATAGAAGCAACACAGCTAGTACTTCATATGTAGAACAGCAGTCTTCAGATCCAATCTCCATAAATGTTTCTGCTAACAAGGATGGAGTCAATAATGTTGATGATCCAGTGGTTAGTGGTGTATCTCAAATCTCTCGTGAGACAGTGCATCCAAGGATTTCAGGACCTCAGGAGCATGGAATTTCTAGTTCTGGTGAAATTTCTATTGAGAATAGCACTGATGCATTCATGGCTTTCCCGAGTCCTTCTTCCGTTCCTATTCCTCAGGTTTCCAGTTTACCAGCAACTTCTCAGTTTCCAGAAGATGAATCTCGCAGAGAGACAATACCTTCTGGTTTAGGTATTCTTGTGTCCAATCGGGAAAGAGTACAGGGAAACGATAGTGTGCTTCAAGTTGATGTGGTCACAATATCCTCCAACATTTTGTCCAGCAGCAACTTTGATGCCAATGATCGTGATTCCAGAAGGAATGGTAGAAGATTATTTTGGGATGCTTTTTCACGACGTAGTTCTAGAAGGCTTGGCGATTCACAAACCATTCTCTTGTCTGCTGGTGGTGCTGATGACCCAGGATCTCAAGATCGATGGCTTGTTGATTTTGGCAGTGATTTCTCAAATGATGGGGTTGGAGGTGCTTCTTCTGGATATATGGGCAGTAGAATTCACAGGTTTAATGAACGAATGCGGCACTCAAGATCTGAGGTCTGGGAAAGGCTTGGTCGTATGAACTCTTCATGTCCATTAGGACTTCATGCCGATGGTATGTGCTCATGTGAGTCTTTCCCAATGGCTGAAGAATCTAGCACTCGAGCAAGTATTTCGAGAATTGTCATGCTGGCTGAGGCTCTGTTTGAGGTTTTAGATGATATCCATAGGCAACCTGTATCGCTTTCCCTGTCCATGGTCTCTCTCCCAGCGCCAGAATCAATTGTCGACTCTTTCCCTCTTAAGTCTCACAAAAAGGTTGATGCAGCTGATGGTAGCAATGATGCTGAACAATGTTACATATGTCTGGCGGAGTATGAAGAAGGCGACCAAATTCGAGTTCTTCCATGCAACCATGAATATCACATGTTGTGTGTTGACAAGTGGCTTAAGGAAATACATGGTGTATGTCCTCTTTGTCGTGGCAATGTTTGTGGAGGCTTCACAGAGTCTTCTACCCACTCAGATGTACCATCTCATTGA 1593 0.4432 MGSANSRLGSRPHSSRVNRNTRFRLSSLLCGGASSTSRSTHQMEEYPSELQVDSTTEFGKGMPKVAEESSLSCTEARIEAATSSDTRTESYGNSTGEGSSINVATRSQRKCLSECKELVPPYEVSAGHSRHESFRDRSNTASTSYVEQQSSDPISINVSANKDGVNNVDDPVVSGVSQISRETVHPRISGPQEHGISSSGEISIENSTDAFMAFPSPSSVPIPQVSSLPATSQFPEDESRRETIPSGLGILVSNRERVQGNDSVLQVDVVTISSNILSSSNFDANDRDSRRNGRRLFWDAFSRRSSRRLGDSQTILLSAGGADDPGSQDRWLVDFGSDFSNDGVGGASSGYMGSRIHRFNERMRHSRSEVWERLGRMNSSCPLGLHADGMCSCESFPMAEESSTRASISRIVMLAEALFEVLDDIHRQPVSLSLSMVSLPAPESIVDSFPLKSHKKVDAADGSNDAEQCYICLAEYEEGDQIRVLPCNHEYHMLCVDKWLKEIHGVCPLCRGNVCGGFTESSTHSDVPSH* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2424 530 MobiDBLite consensus disorder prediction 80 101 - -
Aev01g2424 530 MobiDBLite consensus disorder prediction 124 151 - -
Aev01g2424 530 Pfam Ring finger domain 468 511 IPR001841 -
Aev01g2424 530 MobiDBLite consensus disorder prediction 222 246 - -
Aev01g2424 530 CDD mRING-H2-C3H2C2D_ZSWM2 468 511 - -
Aev01g2424 530 SMART ring_2 469 510 IPR001841 -
Aev01g2424 530 MobiDBLite consensus disorder prediction 1 54 - -
Aev01g2424 530 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 527 - -
Aev01g2424 530 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 527 - -
Aev01g2424 530 SUPERFAMILY RING/U-box 453 514 - -
Aev01g2424 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 434 515 IPR013083 -
Aev01g2424 530 ProSiteProfiles Zinc finger RING-type profile. 469 511 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2424 Aev-Chr1 27981558 27984588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2424 351 515 C3H Transcription Factor Family AT5G45290 49.479 7.01e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2424 - - gmx:100783604 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2424 01 27981558 27984588 Aev01g2424 01 27981558 27984588 ECH