Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2421 ATGACTGCTGCTGCAACCATGTGTGTGCAGGACGGTGAGCAAGTTGCCCAAGATCATATGGACATGGACACCATTGATAACACTAGAAGGGTTTCATGGCCTTTGCATTGTGGTGGTGGTGGTGATCATCATCTCTTGCATACCCACATGGAAAATTTGGAAAAAGGCCCTTCCTTTAGAACTTCTGCAGCAGATTCAATTCCTCTGGAGAGCATATGTGAGGATACAGTGATTGCAGACAAGAAGCAGAACATGATGAACTTTGTCCCTTCTCTTCGGTCCGGCGAGTGGTCCGATATTGGAGGTCGCCCTTACATGGAGGATACTCACATATGCATTGGAGACATGGCAAAGAAATTTGGATATAACGTCCTGTCTGAAGAAGCTGTTTCCTTCTATGGTGTCTTTGATGGACATGGAGGGAAGAGTGCTGCTCAATTTGTCCGTGATCATCTTCCTAGGGTGATTGTTGAGGATGCAGATTTTCCTTTGGAGCTTGAGAAGGTGGTCACAAGGTCATTTTTGGAGATTGATACAGAGTTTGCAAAAACATGCTCTGTTGAGTCTTCCCTCTCTTCTGGTACTACTGCACTAACTGCAATTATATTTGGAAGGTCTTTGCTTGTAGCCAATGCTGGAGACTGCAGGGCTGTCTTGTCCCGTCGCGGGGCGGCTATAGAAATGTCCAAAGATCATAGACCGCTCTGCATTAGAGAAAGGATGCGGATCGAGTCCCTAGGTGGATTCGTCGATGATGGTTACCTAAACGGCCAGTTAGGTGTCACTCGCGCTTTAGGTGACTGGCACCTTGAAGGAATGAAGGAGATGGATGGAAGAGGAGGACCATTGAGTGCTGAGCCTGAACTAAAATTGATGACATTGACCAAAGAAGACGAGTTCTTGATAATCGGTAGCGATGGAATATGGGACGTTTTTCGCAGCCAAAACGCCGTGGATTTCGCACGAAGGAAGCTTCAAGAGCATAATGATGTGAAACAATGTTGCAAGGAAATAATTGAGGAAGCAATAAAGAGAGGCGCGACAGATAACTTGACGGTTGTCATGGTGTGTTTTCACTCGGATCCGCCGCCAGCAGTGGTTGTCGAAAGGGCAAAAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATGCCATCTAGAAGGATAG 1176 0.4643 MTAAATMCVQDGEQVAQDHMDMDTIDNTRRVSWPLHCGGGGDHHLLHTHMENLEKGPSFRTSAADSIPLESICEDTVIADKKQNMMNFVPSLRSGEWSDIGGRPYMEDTHICIGDMAKKFGYNVLSEEAVSFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLEIDTEFAKTCSVESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRRGAAIEMSKDHRPLCIRERMRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEMDGRGGPLSAEPELKLMTLTKEDEFLIIGSDGIWDVFRSQNAVDFARRKLQEHNDVKQCCKEIIEEAIKRGATDNLTVVMVCFHSDPPPAVVVERAKVRRSISAEGLQNLKCHLEG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2421 391 SUPERFAMILY PP2C-like 84 359 IPR036457 -
Aev01g2421 391 ProSiteProfiles PPM-type phosphatase domain profile. 93 358 IPR001932 -
Aev01g2421 391 Pfam Protein phosphatase 2C 105 350 IPR001932 -
Aev01g2421 391 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Aev01g2421 391 CDD PP2Cc 93 358 IPR001932 -
Aev01g2421 391 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 7 379 - -
Aev01g2421 391 Gene3D - 75 361 IPR036457 -
Aev01g2421 391 PANTHER PROTEIN PHOSPHATASE 2C 7 379 IPR015655 GO:0004722|GO:0006470
Aev01g2421 391 SMART PP2C_4 83 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2421 Aev-Chr1 27969815 27972028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2421 82 391 PP2C-type Phosphatase Gene Family AT2G25620 60.828 5.15e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Aev01g2421 PP2C 3.5e-68 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2421 K14803 - gmx:100782648 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2421 01 27969815 27972028 Aev01g2421 01 27969815 27972028 ECH