Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2419 ATGAGGCCTTATTCTTTTGTAGTTTATGTTCTGCTTTTATCACTCATCCTCACAAAAACTCAAGGGATTCGCTTGGGGAAAGCAGGGTCTTTAACCACTGTTCATCAGCAACAGAAACAACAGGGTGAAGATGAGAAAAGTAGTGAAATGCTGAAAAAGAGTAAGAGATCAGGTGGAGTTGTGTGCAAAGATGAAGAAGAATGCACAGGAAACATAAAGAATAGGAAACTTGTTACCACTACTTCAGTTGTTTCTACTCCCCCTACTACCATTTCAAAGTTGAATTGCTCTGTCTTTTCTGCAAGTTCATTTCCTGGGTTGATGCAGGAGTATGAGTCCCAGGTCTTGTGTGGTCTGTGGAGAATGGGAAGTAATAGTTCTGAAAAGATGCCTGGCATTAACAGCACTGGAAGTTCAGAAACCACTATTGAGATAAAGATTAAAACATTGGATTCACAAACTTACACCCTCAGAGTGGATAAACAGATGCCAGTCCCTGCTCTGAAAGAACAGATTGCTTCTATAACTGGTGTGTTATCAGACCAACAGCGCTTAATTTGCCAAGGAAAGGTTCTAAAGGATGATCAACTCTTGTCTGCCTACCATGTTGAAGATGGTCATACTTTGCATATGGTTGTCAGGCAACCTAATCTACCATTACCAGGAAGTTTGGGCAGTCATTCAGGGACTGACCCGAACTCAAGTACAAGCCATGGTCACAGTAGTCAAGTATCCCCAGGTGTATTTATTGAAACGTTCAATGTACCTGTTCAGGGAGATGGAGTTTCTCCTGAGTTCAGCCGGATTGTTTCTGCTGTACTAGGATCTATCGGAATTCCAAGTTTTGGAAGTGCCAGTGAAGGGATCGATGTCAGGGAGCATGATTCCCAAGGCTTTGTAAGAACATCAGGTTCCGGTGGCGTATCAGATTCATCTCCTCAACCTGAACAAGCTGGGTTGCGAAATTTCTCTGATAGATCACGTAACACCTTTGGACATCCAGCAGCAGCTCCTCTTGGGTCTTTGCAGCCTCCTGTGATTCCTGATTCTTTGACAACTTTGTCACAATACATGAGTCATTTAAGCCATGAATTTGATGCAATTGCCAGAGAAGGGGGGAATAATGTTGAGGCAACTGAGGCTCAAAGGAGTGAAGAAAGGAGATCTGTTCCTTCCCGATTGGGTTCAACACCCGAAGCACTTACATCACCTGCATCCTTGGCAGAAGTACTGCTTTCTACCAGACAAATGATGGTTGGACAAGCTGGAGAGTGCCTACGTCAACTTGCAAGACAGGTGGAGAATCAAGCAAATTTAACTGATCCTTTGCTGCGGTCAAGCATTCAGTCTAGGGTTATGAGGGCTGGAGTTCAGTTTTATAACCTAGGTGCATTATTACTTGAGCTTGGTCGCACAACCATGACTTTGCGGTTGGGTCAAACACCGTCTGAAGCTGTAGTTAATGGTGGGCCTGCAGTTTTCATATCTCCATCTGGTCCCAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGCGCAAGTTTTGGTACTCCCCCTGTTGGAACTGCTCAGTCTAACTCAAGTTTAGGTAGTGGACTTGGCTCTAGTTTTTTCCCAAGGCGGATCGATATACAGATACGACGAGGGATATCAACAGCAGCACCAAATGCCAATCCAGAAGAGCGTGGTCATACACAGTCTGCTTCAGCACAAAGAACTCAAGGTGATCGTCCTGTTAATCAGCCAACCTCAAGGCGTCCAGATGCATCCGGTACTGGAGAGTCAGGAGTAAGGATAGTGCCAATTAGAACCATGGTAGCAACAGTACCAGGTCCCTTAGGCCGTCCACCTGCAGATCCGTCTGGTAATTCTATAGGGCTTTACTATCCAGTTCTTGGGAGATTTCAACATGTATCTTCAGGAAATGCAAATAGTGAATCTGGATCTCAACCACCTAGTCAGTCAACTCCTGAATCCACATTGCCAAGGCAAAGCATGGAAGATTCCACTGGGAATGGTTCCTCGTCAACTCCTTCCACAAGCTTGAATTCGCGTGTTGTGAATATTAATATTCTAGCAGCTGGTGGGGCCCAAAATAACCAGGACTCCGAGAGACAGATTCCAAACAGTGTACTTCAGTTTATAAGGACACTCTTTCCTGGCGGAGAAATTCATGTCGAAGACGCAAGTGTACAGGGAGCAGCTGTGGGTTCTACCTCAGAGCAGACTGCCGCAATGTCAAGGGTTGATGCCAACGTCCCTGAAGCTGAACCTAGAGCCAGTGATGAAGGAATATTTTTGTCTAACATACTCCGGGGAATCATGCCCCTCATCTCTCAACATGCAGGGTCTGAGGGAAACCCTTCAGAGGATCAAGTGCCTCAAAATTCTTCAGCCCAGGTCGAAACTGATGCTGGGACATCGCGGAGACGTAGTGGTTCTGAGCCAAGCCCCCCAAATCCAAAACGTCAAAAGATGGAATAA 2487 0.4552 MRPYSFVVYVLLLSLILTKTQGIRLGKAGSLTTVHQQQKQQGEDEKSSEMLKKSKRSGGVVCKDEEECTGNIKNRKLVTTTSVVSTPPTTISKLNCSVFSASSFPGLMQEYESQVLCGLWRMGSNSSEKMPGINSTGSSETTIEIKIKTLDSQTYTLRVDKQMPVPALKEQIASITGVLSDQQRLICQGKVLKDDQLLSAYHVEDGHTLHMVVRQPNLPLPGSLGSHSGTDPNSSTSHGHSSQVSPGVFIETFNVPVQGDGVSPEFSRIVSAVLGSIGIPSFGSASEGIDVREHDSQGFVRTSGSGGVSDSSPQPEQAGLRNFSDRSRNTFGHPAAAPLGSLQPPVIPDSLTTLSQYMSHLSHEFDAIAREGGNNVEATEAQRSEERRSVPSRLGSTPEALTSPASLAEVLLSTRQMMVGQAGECLRQLARQVENQANLTDPLLRSSIQSRVMRAGVQFYNLGALLLELGRTTMTLRLGQTPSEAVVNGGPAVFISPSGPNHIMVQPLPFQPGASFGTPPVGTAQSNSSLGSGLGSSFFPRRIDIQIRRGISTAAPNANPEERGHTQSASAQRTQGDRPVNQPTSRRPDASGTGESGVRIVPIRTMVATVPGPLGRPPADPSGNSIGLYYPVLGRFQHVSSGNANSESGSQPPSQSTPESTLPRQSMEDSTGNGSSSTPSTSLNSRVVNINILAAGGAQNNQDSERQIPNSVLQFIRTLFPGGEIHVEDASVQGAAVGSTSEQTAAMSRVDANVPEAEPRASDEGIFLSNILRGIMPLISQHAGSEGNPSEDQVPQNSSAQVETDAGTSRRRSGSEPSPPNPKRQKME* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2419 828 MobiDBLite consensus disorder prediction 553 602 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 640 683 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 221 244 - -
Aev01g2419 828 Gene3D - 136 223 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 781 828 - -
Aev01g2419 828 PANTHER SCYTHE PROTEIN UBIQUITIN-LIKE DOMAIN PROTEIN 122 828 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 298 329 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 518 535 - -
Aev01g2419 828 Pfam Ubiquitin family 145 215 IPR000626 GO:0005515
Aev01g2419 828 SMART ubq_7 143 214 IPR000626 GO:0005515
Aev01g2419 828 ProSiteProfiles Ubiquitin domain profile. 143 218 IPR000626 GO:0005515
Aev01g2419 828 MobiDBLite consensus disorder prediction 559 591 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 377 401 - -
Aev01g2419 828 PRINTS Ubiquitin signature 153 173 IPR019956 -
Aev01g2419 828 PRINTS Ubiquitin signature 174 194 IPR019956 -
Aev01g2419 828 PRINTS Ubiquitin signature 195 216 IPR019956 -
Aev01g2419 828 MobiDBLite consensus disorder prediction 297 344 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 783 820 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 516 535 - -
Aev01g2419 828 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 122 828 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 216 244 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 36 56 - -
Aev01g2419 828 MobiDBLite consensus disorder prediction 39 56 - -
Aev01g2419 828 SUPERFAMILY Ubiquitin-like 134 232 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2419 Aev-Chr1 27948456 27959968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2419 143 214 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.36e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2419 K23390 - gmx:100783070 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2419 01 27948456 27959968 Aev01g2419 01 27948456 27959968 ECH