Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2368 ATGGCCATGGAGATGGAGAAGAAGTGCGGTTGCTGGGGTGCCCTGAAACGCGGTGTTAGAGGTTCGTGCAAAACTTCAGCTTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTCATGATGCAGCAACTGAGACAAGATACCTGAATGCTAGCAATAGAGAACTATGTGCTCCCAATGAAGCTAGATTATCTTCTGATAATCCTGATCCCCAACCTCAGGAGAATAAGGCTCCTCGCCCTCTCCTTCAATTTACATTTCAAGAACTAAAAGCTGCTACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAGGGTGGTTTCGGTTATGTTTTCAAAGGATGGATCGAGGAGGATGGAACTGCGCCGGCAAAACCTGGGTCTGGGATTACGGTGGCTGTCAAAAGCTTGAAGCCAGATGGCCTTCAAGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAACCTTGTGAAACTTATTGGCTACTGCATCGAAGATGATCAGAGGCTTCTTGTTTATGAGTTTATGACCCGTGGCAGTCTAGAGAATCATCTCTTCAGAAGAACTGTGCCTCTTCCTTGGTCCAACAGGGTTAAGATTGCACTTGGAGCGGCTAAAGGATTGGCCTTCCTACACAATGGCCCAGAACCAGTCATTTATAGAGATTTTAAAACATCAAACATTTTGCTTGATACGGAGTATAATGCGAAGCTTTCAGATTTTGGTCTAGCCAAAGCTGGGCCTCAAGGAGACAAGACACATGTTTCTACTAGAGTTGTTGGGACTTACGGCTATGCTGCTCCGGAATATGTCATGACAGGACACTTAACAGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTGCTAGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGGCCGAGCGGCGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAACTATACCAACTGGTGGATCCTCGCTTGGAACTTAATTACTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCTTACAGTTGCCTCAGTAGAGATCCCAAATGCCGGCCTAACATGGATGAAGTTGTGAAGGCTCTGACTCCACTGCAGGATCTCAACGACCTCGCGATCCTGTCATACCACACTCGAATATCGCAACAAGGGAGACGGAAAAAGAAATTGGATGGAACTCCACAGATCACCTACACACAGTCCAAGAGCATGAGGGCTTCTCCCTTGAATACTAGCGGTAAGCAGCATCGATGA 1302 0.4601 MAMEMEKKCGCWGALKRGVRGSCKTSASRDSANTIPRTSLVHDAATETRYLNASNRELCAPNEARLSSDNPDPQPQENKAPRPLLQFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALTPLQDLNDLAILSYHTRISQQGRRKKKLDGTPQITYTQSKSMRASPLNTSGKQHR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2368 433 Gene3D Transferase(Phosphotransferase) domain 1 185 396 - -
Aev01g2368 433 ProSitePatterns Protein kinases ATP-binding region signature. 105 137 IPR017441 GO:0005524
Aev01g2368 433 PANTHER OS01G0588500 PROTEIN 70 399 - -
Aev01g2368 433 Gene3D Phosphorylase Kinase; domain 1 64 184 - -
Aev01g2368 433 MobiDBLite consensus disorder prediction 399 433 - -
Aev01g2368 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Aev01g2368 433 MobiDBLite consensus disorder prediction 63 82 - -
Aev01g2368 433 SUPERFAMILY Protein kinase-like (PK-like) 82 386 IPR011009 -
Aev01g2368 433 ProSiteProfiles Protein kinase domain profile. 99 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2368 433 Pfam Protein tyrosine and serine/threonine kinase 103 378 IPR001245 GO:0004672|GO:0006468
Aev01g2368 433 CDD STKc_IRAK 105 381 - -
Aev01g2368 433 MobiDBLite consensus disorder prediction 409 433 - -
Aev01g2368 433 PANTHER OS01G0588500 PROTEIN-RELATED 70 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2368 Aev-Chr1 27574406 27577603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2368 87 378 Glycoside Hydrolase AT3G07070 55.743 9.56e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aev01g2368 PK_Tyr_Ser-Thr 9.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2368 - - aprc:113848012 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2368 01 27574406 27577603 Aev01g2368 01 27574406 27577603 ECH