Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2353 ATGTCGAGCTGCAGCATCATGGATGTTGGCCCAGAGCAACTATGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCAGCAGCCTGTTTGACATGGTGACGGTGCGATGTGGGCACTGCAGCAATCTGTGGTCGGTGAACATGGCCGCTGCCTTTCACTCTCTCGCATGGCAAGATGTTGTTCATCAGGGAGGTGGACAGTGCAATAATCCAGTGGAGTATAGGATTGACACAGGTTCCTCTTCCAAATGCAACAACAGGCTTGCAATGCGTGCACCCACCAATCATGTTACTGAGGAAAGGGTTGTCAATAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATTCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGGGAAGCATTCAGTACTGCTGCAAAGAACTGGGCACATTTTCCTCATATTCATTTTGGGCTGATGTTGGAGAACAATCAAGCTAAGATGGACAATGCCTCTGAGAAGCACTTGATGTCAAGGGCTGCGTTGTTGAACAAATGA 573 0.4782 MSSCSIMDVGPEQLCYIPCNFCNIVLAVSVPCSSLFDMVTVRCGHCSNLWSVNMAAAFHSLAWQDVVHQGGGQCNNPVEYRIDTGSSSKCNNRLAMRAPTNHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLENNQAKMDNASEKHLMSRAALLNK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2353 190 SUPERFAMILY HMG-box 108 157 IPR036910 -
Aev01g2353 190 PANTHER AXIAL REGULATOR YABBY 5 1 180 - -
Aev01g2353 190 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Aev01g2353 190 Gene3D High mobility group box domain 102 182 IPR036910 -
Aev01g2353 190 PANTHER PROTEIN YABBY 6-RELATED 1 180 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2353 Aev-Chr1 27430587 27434684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2353 9 173 C2C2-YABBY Transcription Factor Family AT2G26580 71.257 1.97e-82 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev01g2353 YABBY 6e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2353 K25796 - gmx:100499942 347.051