Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev01g2323 | ATGGTGTGGACTCAGAACCTTCCTCGTCCCCCTCGTTGCAGTTACAACGGTGATGCCTCCTTCCCCTTCTCCCCCAACGACAACGGTTACAATCGTTCTTCTGCTCCAAGGCCACGTGGCAGGGGTGGTTACGTAACTGGCCGTTCCGGTGCTCGCGGACGTGGCCGCTGGAATTCTCGCCCGGAAAATGACTTTTACTCTAACCGGAACGATCGGTCCCCGTTCGATGTTGCCGATGGCTTCAACCAGCTTGATTTGAAAGACGAAGGTGAGAACGGTGGCGGAGGAATCAATTTCGACGCGTATGAATCGGTTCCGGTGGAGGTCAGCGGTGAGAACGTGCCTCCGCCGGTCAATACTTTCGCGGAGACGGATCTTGACGAAGGTCTTAAGGTAAACATCGAGAGGTGCAAGTACGTGAAGCCTACTCCGATTCAGCGTCACGCGATTCCTATTGTTTCTGCGGGTCGTGACTTGATGGCGTGCGCACAAACAGGGTCGGGTAAAACGGCGGCGTTTTGTTTTCCGATCATTTCTGGGATTCTGAATGGTCGTAATGGGTCTTCTTCTGTGGGTCGTCGTGGTGGCGTTTTTGTTTCGTACCCAACGGCGCTTATTCTTTCTCCTACTAGGGAGTTGTCTTGTCAGATTCATGATGAAGCCAAGAAGTTTGCTTATCAAACTGGAGTGAAGGTTGTTGTTGCTTATGGTGGCGCTCCTATTTCTCAACAGCTCCGTAATTTAGAGAAAGGTGTTGACATCCTTGTTGCAACTCCTGGGCGTTTGGTGGATATCATTGAGAGAGAAAGGGTTTCACTGACAAAGATAAAGTATCTTGCTTTGGATGAAGCTGACCGTATGTTGGACATGGGTTTTGAGCACCAGATACGGAAAATTGTTCAGCAGATGCACATGCCTTCTCCTGGTGCAAGACAGACAATGCTTTTCAGTGCTACATTCCCTGATGATATACAGAAGCTTGCGTCTGATTTTTTATCAAATTACATATTCCTGTCTGTTGGAAGGGTTGGCTCTAGCACTGAACTGATTGTACAGAAAGTTGTACAAGTTGAAGATATGGAAAAAAGAGACCATCTAAAGGATCTTCTCCGTGGTCAAAGGGCAAATGGTGCCAATGGGAAGCCAGCTCTGGTTCTTGTATTTGTTGAGACAAAGAGGGGAGCGGATACTTTAGAAAACTGGTTGTCGAGAAATGGGCTTCCTGCAATTGCAATACATGGTGACAAAGTTCAAATGGAGAGGGAACGAGCTTTAAGATCTTTCAAAAGTGGTATTACTCCTATTTTGGTGGCAACTGATGTTGCTTCCCGAGGTTTGGATATTCCGCATGTTGCCCATGTTATCAACTTTGACTTGCCAAGAGGCATAGATGACTACGTTCATAGAATTGGCAGAACAGGTCGTGCTGGCAAGTCTGGTTTAGCCACTGCTTTCTTCAGCCACAAGAATATTCCTATTGCCAAGGCCCTTGTTGGACTCTTGCAAGAAGCAAAACAAGAAGTTCCGTCTTGGCTGACCCAATATGCTGATGGTTCATCCTATAGTGGTGGTGGTGGTGGCCATCGATCTCAGCGGTATGGCAGTGGAAGATATGGCGGCCGTGACTTCAGGAATTTCTCTGAACCTGAAATGGAGAATTACAACCACTCAAGTACTTATGGCGGCAATGCAGAATATAATGTTGATTTCAATGGTCATGCTGGTTCTATAGCTTATGACATCACAGATACAGTTCCTGCTGCTAGTTACCATGATACTGATGCTAATACTGATATGTTTGGAGGTGAAATGGTTGTTGAAGATGGGCCAAGTGGTTACCAATCTATTGTTGCCAGTGGGTGGGAATAG | 1869 | 0.4708 | MVWTQNLPRPPRCSYNGDASFPFSPNDNGYNRSSAPRPRGRGGYVTGRSGARGRGRWNSRPENDFYSNRNDRSPFDVADGFNQLDLKDEGENGGGGINFDAYESVPVEVSGENVPPPVNTFAETDLDEGLKVNIERCKYVKPTPIQRHAIPIVSAGRDLMACAQTGSGKTAAFCFPIISGILNGRNGSSSVGRRGGVFVSYPTALILSPTRELSCQIHDEAKKFAYQTGVKVVVAYGGAPISQQLRNLEKGVDILVATPGRLVDIIERERVSLTKIKYLALDEADRMLDMGFEHQIRKIVQQMHMPSPGARQTMLFSATFPDDIQKLASDFLSNYIFLSVGRVGSSTELIVQKVVQVEDMEKRDHLKDLLRGQRANGANGKPALVLVFVETKRGADTLENWLSRNGLPAIAIHGDKVQMERERALRSFKSGITPILVATDVASRGLDIPHVAHVINFDLPRGIDDYVHRIGRTGRAGKSGLATAFFSHKNIPIAKALVGLLQEAKQEVPSWLTQYADGSSYSGGGGGHRSQRYGSGRYGGRDFRNFSEPEMENYNHSSTYGGNAEYNVDFNGHAGSIAYDITDTVPAASYHDTDANTDMFGGEMVVEDGPSGYQSIVASGWE* | 623 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev01g2323 | 622 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - | |
Aev01g2323 | 622 | CDD | DEADc_DDX3_DDX4 | 120 | 344 | IPR044763 | GO:0003724|GO:0005524 | |
Aev01g2323 | 622 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 362 | 516 | IPR001650 | - | |
Aev01g2323 | 622 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 119 | 147 | IPR014014 | GO:0003724 | |
Aev01g2323 | 622 | Gene3D | - | 82 | 339 | IPR027417 | - | |
Aev01g2323 | 622 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 49 | 556 | - | - | |
Aev01g2323 | 622 | SMART | helicmild6 | 396 | 477 | IPR001650 | - | |
Aev01g2323 | 622 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 203 | 494 | IPR027417 | - | |
Aev01g2323 | 622 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 | 49 | 556 | - | - | |
Aev01g2323 | 622 | Gene3D | - | 340 | 520 | IPR027417 | - | |
Aev01g2323 | 622 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Aev01g2323 | 622 | SMART | ultradead3 | 138 | 353 | IPR014001 | - | |
Aev01g2323 | 622 | MobiDBLite | consensus disorder prediction | 55 | 69 | - | - | |
Aev01g2323 | 622 | Pfam | Helicase conserved C-terminal domain | 362 | 477 | IPR001650 | - | |
Aev01g2323 | 622 | CDD | SF2_C_DEAD | 350 | 486 | - | - | |
Aev01g2323 | 622 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 150 | 338 | IPR014001 | - | |
Aev01g2323 | 622 | Pfam | DEAD/DEAH box helicase | 143 | 327 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev01g2323 | Aev-Chr1 | 27251380 | 27254586 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev01g2323 | 117 | 509 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.487 | 1.24e-58 | 200 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev01g2323 | K11594 | - | gmx:100791226 | 771.541 |