Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2323 ATGGTGTGGACTCAGAACCTTCCTCGTCCCCCTCGTTGCAGTTACAACGGTGATGCCTCCTTCCCCTTCTCCCCCAACGACAACGGTTACAATCGTTCTTCTGCTCCAAGGCCACGTGGCAGGGGTGGTTACGTAACTGGCCGTTCCGGTGCTCGCGGACGTGGCCGCTGGAATTCTCGCCCGGAAAATGACTTTTACTCTAACCGGAACGATCGGTCCCCGTTCGATGTTGCCGATGGCTTCAACCAGCTTGATTTGAAAGACGAAGGTGAGAACGGTGGCGGAGGAATCAATTTCGACGCGTATGAATCGGTTCCGGTGGAGGTCAGCGGTGAGAACGTGCCTCCGCCGGTCAATACTTTCGCGGAGACGGATCTTGACGAAGGTCTTAAGGTAAACATCGAGAGGTGCAAGTACGTGAAGCCTACTCCGATTCAGCGTCACGCGATTCCTATTGTTTCTGCGGGTCGTGACTTGATGGCGTGCGCACAAACAGGGTCGGGTAAAACGGCGGCGTTTTGTTTTCCGATCATTTCTGGGATTCTGAATGGTCGTAATGGGTCTTCTTCTGTGGGTCGTCGTGGTGGCGTTTTTGTTTCGTACCCAACGGCGCTTATTCTTTCTCCTACTAGGGAGTTGTCTTGTCAGATTCATGATGAAGCCAAGAAGTTTGCTTATCAAACTGGAGTGAAGGTTGTTGTTGCTTATGGTGGCGCTCCTATTTCTCAACAGCTCCGTAATTTAGAGAAAGGTGTTGACATCCTTGTTGCAACTCCTGGGCGTTTGGTGGATATCATTGAGAGAGAAAGGGTTTCACTGACAAAGATAAAGTATCTTGCTTTGGATGAAGCTGACCGTATGTTGGACATGGGTTTTGAGCACCAGATACGGAAAATTGTTCAGCAGATGCACATGCCTTCTCCTGGTGCAAGACAGACAATGCTTTTCAGTGCTACATTCCCTGATGATATACAGAAGCTTGCGTCTGATTTTTTATCAAATTACATATTCCTGTCTGTTGGAAGGGTTGGCTCTAGCACTGAACTGATTGTACAGAAAGTTGTACAAGTTGAAGATATGGAAAAAAGAGACCATCTAAAGGATCTTCTCCGTGGTCAAAGGGCAAATGGTGCCAATGGGAAGCCAGCTCTGGTTCTTGTATTTGTTGAGACAAAGAGGGGAGCGGATACTTTAGAAAACTGGTTGTCGAGAAATGGGCTTCCTGCAATTGCAATACATGGTGACAAAGTTCAAATGGAGAGGGAACGAGCTTTAAGATCTTTCAAAAGTGGTATTACTCCTATTTTGGTGGCAACTGATGTTGCTTCCCGAGGTTTGGATATTCCGCATGTTGCCCATGTTATCAACTTTGACTTGCCAAGAGGCATAGATGACTACGTTCATAGAATTGGCAGAACAGGTCGTGCTGGCAAGTCTGGTTTAGCCACTGCTTTCTTCAGCCACAAGAATATTCCTATTGCCAAGGCCCTTGTTGGACTCTTGCAAGAAGCAAAACAAGAAGTTCCGTCTTGGCTGACCCAATATGCTGATGGTTCATCCTATAGTGGTGGTGGTGGTGGCCATCGATCTCAGCGGTATGGCAGTGGAAGATATGGCGGCCGTGACTTCAGGAATTTCTCTGAACCTGAAATGGAGAATTACAACCACTCAAGTACTTATGGCGGCAATGCAGAATATAATGTTGATTTCAATGGTCATGCTGGTTCTATAGCTTATGACATCACAGATACAGTTCCTGCTGCTAGTTACCATGATACTGATGCTAATACTGATATGTTTGGAGGTGAAATGGTTGTTGAAGATGGGCCAAGTGGTTACCAATCTATTGTTGCCAGTGGGTGGGAATAG 1869 0.4708 MVWTQNLPRPPRCSYNGDASFPFSPNDNGYNRSSAPRPRGRGGYVTGRSGARGRGRWNSRPENDFYSNRNDRSPFDVADGFNQLDLKDEGENGGGGINFDAYESVPVEVSGENVPPPVNTFAETDLDEGLKVNIERCKYVKPTPIQRHAIPIVSAGRDLMACAQTGSGKTAAFCFPIISGILNGRNGSSSVGRRGGVFVSYPTALILSPTRELSCQIHDEAKKFAYQTGVKVVVAYGGAPISQQLRNLEKGVDILVATPGRLVDIIERERVSLTKIKYLALDEADRMLDMGFEHQIRKIVQQMHMPSPGARQTMLFSATFPDDIQKLASDFLSNYIFLSVGRVGSSTELIVQKVVQVEDMEKRDHLKDLLRGQRANGANGKPALVLVFVETKRGADTLENWLSRNGLPAIAIHGDKVQMERERALRSFKSGITPILVATDVASRGLDIPHVAHVINFDLPRGIDDYVHRIGRTGRAGKSGLATAFFSHKNIPIAKALVGLLQEAKQEVPSWLTQYADGSSYSGGGGGHRSQRYGSGRYGGRDFRNFSEPEMENYNHSSTYGGNAEYNVDFNGHAGSIAYDITDTVPAASYHDTDANTDMFGGEMVVEDGPSGYQSIVASGWE* 623
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2323 622 MobiDBLite consensus disorder prediction 1 72 - -
Aev01g2323 622 CDD DEADc_DDX3_DDX4 120 344 IPR044763 GO:0003724|GO:0005524
Aev01g2323 622 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 362 516 IPR001650 -
Aev01g2323 622 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 119 147 IPR014014 GO:0003724
Aev01g2323 622 Gene3D - 82 339 IPR027417 -
Aev01g2323 622 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 49 556 - -
Aev01g2323 622 SMART helicmild6 396 477 IPR001650 -
Aev01g2323 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 494 IPR027417 -
Aev01g2323 622 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 49 556 - -
Aev01g2323 622 Gene3D - 340 520 IPR027417 -
Aev01g2323 622 MobiDBLite consensus disorder prediction 19 33 - -
Aev01g2323 622 SMART ultradead3 138 353 IPR014001 -
Aev01g2323 622 MobiDBLite consensus disorder prediction 55 69 - -
Aev01g2323 622 Pfam Helicase conserved C-terminal domain 362 477 IPR001650 -
Aev01g2323 622 CDD SF2_C_DEAD 350 486 - -
Aev01g2323 622 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 150 338 IPR014001 -
Aev01g2323 622 Pfam DEAD/DEAH box helicase 143 327 IPR011545 GO:0003676|GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev01g2323 Aev-Chr1 27251380 27254586 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2323 117 509 Eukaryotic Initiation Factors Gene Family AT3G19760 32.487 1.24e-58 200
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2323 K11594 - gmx:100791226 771.541