Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2314 ATGGACGACGATTTGCTGAAGCGCAACACCGATTGCGTCTATTTCCTAGCCTCTCCCCTCACTTGCAAGAAGGGGGCTGAATGTGAGTATCGGCATAATGAGATTGCTAGGCTTAACCCTAGGGATTGCTGGTACTGGTTATCTGGGAATTGCCTTAATCCTACTTGTGCTTTCAGGCACCCTCCATTGGATGGGCATACTGGAGTGCCATCTGAACCTGCACAATCTTCATTACCTGCAAATAAGACAATGGTTCCCTGTTATTTTTTCTTCAATGGATTTTGCACCAAAGGAGACAGATGCTCATTTTTGCACGGGCCTGAAGATAGCTATTTGACTGTAAAGCCTGTAAAGAATGACAAGGGAGGCACTGATGCACGCAGCCCAGAAAATAAGGTGTCATCAGCAAATAAAACAGTTGTAGCATCCACACCTACTGAAACACATGTTAACCCATCTTTAACCGCCACAAAGACTTTGTTCGATTTCAAACCTACCCCTGACGAAGATCGTCAATTACCCTTACCCAAAAATGTTAAACAGCAAGATGATTACCTAGAGATACCTGTTTTCGAGTATGAAGAAGCTGCAGTTACTAGGTCAGATTCTCCATATCCGGATGAAGGATTTGTCCATAACATGTCTCATTTAGGCACTGAGCATAGTTCAGATGAGCAAGTAAATGGTCACATAGAGCCTGAGGAGCGGTGGGAATCATCCCCTGGATTTGATGTTCTTGTTCATGATGAATCAGAGAATGTGGGTTATGAGGATGATGCTGAATATTTGCCAGTGCTTGATGGAGCACACCAGGAAGTGAATGAGCAATACTTGGGCTATGAATTTAAAGACCAAGATGAGTATGATACTACGTGCCTAGAAGCTGATGTTCTCTATGAACAAGAAATGTATGGTGGTTATAGATGTTTAGATAGAGATCTGATTCATGGTAATGGCAGAAGAGCCCGTGCTTGTTCCAGAGAGATAATGGTTGATTCTATATTGACCAGGAAAAGGATTCGGATGGCTGACATGGCTGCTTGTGACAGGAACTTAGATCTTCGAGACCATCTCAGGAGACGTAGGGAATTTAGTGATCCTCCTGGTACTGGCTTCTTAAGAAGACACGAATCATCTTCTTTGATGGTCCGAAACCCGGAAAGGCATCATATGCATTGCAGTGAACAGCGACTAAGTAGAAGATTGACATCACAAGTGGGATTTAGCACCATTGACTCGATGGGAGAGGTTGAAACTCTTTCAACTGCTAACAGGCAAAGGTTCTATAGGAATTCCCAGCAACATAGGCCAAGGAAGCAGCATTACAGAGAAAAACCATCCAAACGCCACTTTGTCTCATCTAATGTCTCCAGGAAACTGGTTTTTAAGCAAAGGAGATTTATTCATGAGTCCTCTACATTTACAGGGCCTAAGTCCCTCGCCGAAATCAAACAAGAGAAGAAGGTGGCCGGAGAAAGTTGGCACTTCAAAAGCACATCAGCTGATTTTCAGGATCCCAAGCCTCTGAGTGAAATCCTCAAGAACAAGAGGAGTGAGGATCGAGTAGGAGATGGCAATTCCTGCAACAGTTGA 1593 0.4382 MDDDLLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGNCLNPTCAFRHPPLDGHTGVPSEPAQSSLPANKTMVPCYFFFNGFCTKGDRCSFLHGPEDSYLTVKPVKNDKGGTDARSPENKVSSANKTVVASTPTETHVNPSLTATKTLFDFKPTPDEDRQLPLPKNVKQQDDYLEIPVFEYEEAAVTRSDSPYPDEGFVHNMSHLGTEHSSDEQVNGHIEPEERWESSPGFDVLVHDESENVGYEDDAEYLPVLDGAHQEVNEQYLGYEFKDQDEYDTTCLEADVLYEQEMYGGYRCLDRDLIHGNGRRARACSREIMVDSILTRKRIRMADMAACDRNLDLRDHLRRRREFSDPPGTGFLRRHESSSLMVRNPERHHMHCSEQRLSRRLTSQVGFSTIDSMGEVETLSTANRQRFYRNSQQHRPRKQHYREKPSKRHFVSSNVSRKLVFKQRRFIHESSTFTGPKSLAEIKQEKKVAGESWHFKSTSADFQDPKPLSEILKNKRSEDRVGDGNSCNS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2314 530 Pfam Zinc-finger containing family 7 63 IPR041686 -
Aev01g2314 530 Coils Coil 529 530 - -
Aev01g2314 530 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Aev01g2314 530 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Aev01g2314 530 MobiDBLite consensus disorder prediction 431 446 - -
Aev01g2314 530 MobiDBLite consensus disorder prediction 494 530 - -
Aev01g2314 530 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 517 - -
Aev01g2314 530 MobiDBLite consensus disorder prediction 115 151 - -
Aev01g2314 530 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE 1 517 - -
Aev01g2314 530 MobiDBLite consensus disorder prediction 509 523 - -
Aev01g2314 530 MobiDBLite consensus disorder prediction 424 450 - -
Aev01g2314 530 SUPERFAMILY CCCH zinc finger 81 106 IPR036855 GO:0046872
Aev01g2314 530 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Aev01g2314 530 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Aev01g2314 530 SMART c3hfinal6 81 107 IPR000571 GO:0046872
Aev01g2314 530 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Aev01g2314 530 Gene3D - 72 139 - -
Aev01g2314 530 Gene3D - 3 63 - -
Aev01g2314 530 MobiDBLite consensus disorder prediction 128 151 - -
Aev01g2314 530 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 84 107 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2314 Aev-Chr1 27205970 27208680 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev01g2314 zf-CCCH_3 1.5e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2314 - - aprc:113847503 786.178