LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g2313	ATGGCTACACTGTTGAAGAGGGTTGCGAGAGCCACCACTCCCATCGCGTTCGCCAATGCCTTCGCTCGCCAATCATCCAAGTCCACTCATCAATCCAATTTCCGCATACCATTCACTGCCATCGCCGCCGTCTCCGGCGGTGCTTCCTTCCTTTATTTCCTATCCTCTCCCAACCTCGTTCATTCAGAACAAGCGGAAGAAGGGGAAAGCAAGAATATCGCACTCAATCCTGATAAATGGCTCGAATTTAAGTTGCAAGACACTGCCAGGGTCAGTCACAATACTCAGTTATTCAGATTTTCGTTTGATCCCAGCAAAAAGCTGGGTTTGGATATTGCTTCTTGCATTCTTACAAGGGCTCCATTGGGAGAAGATGCTGAAGGAAAACCAAAATTTGTCGTACGCCCGTATACTCCGATATCAGATCCAGAAGCCAAAGGATATTTTGACTTGTTAATCAAGGTATATCCTGAAGGGAAAATGAGCCAGCATTTTGCAAGCTTGAAACCAGGTGATGTTGTTGAAGTGAAAGGGCCCATTGAAAAGCTCAGATATACTCCAAATATGAAGAAGCATATTGGCATGATTGCTGGTGGCTCAGGAATCACTCCAATGCTTCAAGTAATCGAGGCAATATTGAAGAATCCTGAGGACAAAACTCAGATATCATTACTGTATGCCAATATCTCCCCAGATGACATACTGCTTAAACAGAAGCTTGACGTTCTAGCATCAACCCACCCCAACTTAAAGATATTCTACACTGTAGATAATCCAACTAAAAATTGGAGAGGAGGTGCAGGTTACATATCACAGGACATGGTTGTGAAAGGCTTACCTGCTCCTAGTGATGATACTCTTATACTCGTTTGTGGCCCCCCTGGGATGATGAAACACATATCTGGTGAAAAGGCCAAAGATTGGACACAAGGAGAAGTTTCTGGGATACTCAAAGAAGTTGGGTTCACAGAGCAAATGGTTTACAAATTTTGA	993	0.4391	MATLLKRVARATTPIAFANAFARQSSKSTHQSNFRIPFTAIAAVSGGASFLYFLSSPNLVHSEQAEEGESKNIALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSKKLGLDIASCILTRAPLGEDAEGKPKFVVRPYTPISDPEAKGYFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYTPNMKKHIGMIAGGSGITPMLQVIEAILKNPEDKTQISLLYANISPDDILLKQKLDVLASTHPNLKIFYTVDNPTKNWRGGAGYISQDMVVKGLPAPSDDTLILVCGPPGMMKHISGEKAKDWTQGEVSGILKEVGFTEQMVYKF*	331

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g2313	330	PANTHER	NADH-CYTOCHROME B5 REDUCTASE-LIKE	28	330	-	-
	Aev01g2313	330	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	232	243	IPR001709	GO:0016491
	Aev01g2313	330	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	135	142	IPR001709	GO:0016491
	Aev01g2313	330	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	287	295	IPR001709	GO:0016491
	Aev01g2313	330	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	194	213	IPR001709	GO:0016491
	Aev01g2313	330	SUPERFAMILY	Riboflavin synthase domain-like	73	188	IPR017938	-
	Aev01g2313	330	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	78	186	IPR017927	GO:0016491
	Aev01g2313	330	Pfam	Oxidoreductase NAD-binding domain	195	301	IPR001433	GO:0016491
	Aev01g2313	330	Pfam	Oxidoreductase FAD-binding domain	83	185	IPR008333	-
	Aev01g2313	330	CDD	cyt_b5_reduct_like	83	330	-	-
	Aev01g2313	330	Gene3D	-	177	330	IPR039261	-
	Aev01g2313	330	Gene3D	Translation factors	73	176	-	-
	Aev01g2313	330	PRINTS	Cytochrome B5 reductase signature	135	142	-	-
	Aev01g2313	330	PRINTS	Cytochrome B5 reductase signature	232	243	-	-
	Aev01g2313	330	PRINTS	Cytochrome B5 reductase signature	171	185	-	-
	Aev01g2313	330	PRINTS	Cytochrome B5 reductase signature	287	295	-	-
	Aev01g2313	330	PRINTS	Cytochrome B5 reductase signature	194	213	-	-
	Aev01g2313	330	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	172	327	IPR039261	-
	Aev01g2313	330	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	28	330	IPR001834	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g2313	Aev-Chr1	27200997	27204842	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g2313	52	330	NADPH P450 reductases	AT5G17770	39.502	5.80e-66	207

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g2313	K00326		-	gmx:100781191	566.229