Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2289 ATGAAAAGGGAAGTGCAGCTGCAGCCACCGCCGGTTCAGCAAAACCCTAGTGATTCCGACCCTTTACTCGATAACCAGGGCGATGATTTTTCCCCTGGAAGTTCCTCTGAGATCAAAGATGAGGACTTGGAGGCTGGTTCACTCCCTTGTTGTCGAATTTGCCTTGAAACTGATTCCGACCCAGATGATGAATTGATATCTCCATGCATGTGCAAAGGTACCCAACAATTTGTACACCGTTCATGTCTTGATCACTGGCGTTCAGTAAAGGAAGGATTTGCCTTCTCGCACTGCACCACTTGCAAAGCCCAATTTCATCTCAGAGTTGAATTGTATGAGGATAACTCATGGCGCAAAATAAAGTTCAGACTTTTTGTGGCAAGGGATGTTTTCCTTGTTTTTCTGGCTGTACAGACCGTGATATCTGCTATGGGTGGTTTTGCATACATCATGGATAAAGATGGGACCTTCAGGAACTCTTTTGATGATGGTTGGGACAGGATACTGTCAAAACATCCTATACCATTTTATTATTGTATTGGAGTGCTGGCCTTCTTTGTACTGATTGGATTTTTTGGTCTCATACTACATTGCTCCTCCCTCAATAGCAATGACCCCAGAATGGCTGGTTGTCAGAACTGTTGTTATGGATGGGGCATCTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCCCTTGTGGTGGTTTTCGTCGTCATTTTTGCTATTCTCGGTATAGCTTACGGTTTCCTTGCAGCCACCATGGCCATCCAAAGAATTTGGCAGAGACACTACCATATCCTCACCAAGAGGGAGCTTACAAAGGAATACATAGTAGAGGATCTTGGGGGGACTTATTTTCCACCAAAGTTGGACCCAGAAAATGAAGCCCGGTTGAAGATGCTTCAGCTTTTGTGA 921 0.4484 MKREVQLQPPPVQQNPSDSDPLLDNQGDDFSPGSSSEIKDEDLEAGSLPCCRICLETDSDPDDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELYEDNSWRKIKFRLFVARDVFLVFLAVQTVISAMGGFAYIMDKDGTFRNSFDDGWDRILSKHPIPFYYCIGVLAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLGGTYFPPKLDPENEARLKMLQLL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2289 306 MobiDBLite consensus disorder prediction 1 40 - -
Aev01g2289 306 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 306 - -
Aev01g2289 306 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 306 - -
Aev01g2289 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 116 IPR013083 -
Aev01g2289 306 SMART ringv_2 50 102 IPR011016 GO:0008270
Aev01g2289 306 Pfam RING-variant domain 51 101 IPR011016 GO:0008270
Aev01g2289 306 ProSiteProfiles Zinc finger RING-CH-type profile. 43 108 IPR011016 GO:0008270
Aev01g2289 306 CDD RING_CH-C4HC3_MARCH 51 102 - -
Aev01g2289 306 SUPERFAMILY RING/U-box 48 106 - -
Aev01g2289 306 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2289 Aev-Chr1 27048827 27052680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2289 1 306 C3H Transcription Factor Family AT1G11020 79.128 1.34e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2289 - - gmx:100818950 571.622