Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2285 ATGGACAAGAAAAAGGTGGCGGTTCCTCTTGTGTGCCATGGCCACTCTCGCCCAGTGGTTGATCTATTCTACAGTCCTGTTACCCCTGATGGATTCTTCCTCATCAGTGCAAGCAAGGATTCTAGTCCTATGCTGAGGAATGGAGAGACTGGGGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCTGTATGGAGTTGCTGCTTGGATACTAATGCGTTACGTGCTGCAACTGCTTCTGCTGATTTCTCCACGAAAGTTTGGGATGCATTAACAGGAGATGAATTGCACTCTTTTGAGCATAAGCACATCGTTCGAGCTTGTGCTTTTTCTGAGAATACACACCTTTTGCTCACTGGGGGAGTAGAGAAAATTCTCCGTATTTATGATCTGAATCGGCATGATGCACCACCCAGGGAAGTGGATAAATCTCCTGGGTCAGTCAGAACTGTTGCATGGCTTCACAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATATACGAACTGGTAAAATAGTTCAGACACTCGAAACCAAGTCATCTGTTACAAGTGCTGAAGTGAGTCAGGATGGCCGTTATATTACAACTGCTGATGGTTCTACCGTGAAGTTTTGGGATGCAAACTACTATGGATTGGTAAAGAGCTATGACATGCCTTGTACTGTGGAATCAGCTTCCTTGGAGCCAAAGTATGGGAACAAGTTCATTGCTGGGGGAGAAGATATGTGGGTTCATGTATTTGATTTCCATACAGGCAATGAGATTGGATGCAACAAGGGCCACCATGGTCCCGTCCACTGTGTCCGTTTCTCTCCTGGAGGAGAATCATATGCTTCAGGATCTGAAGATGGAACCATCAGAATATGGCAGACAGGTCCATTGACTCATGATGAATCCGAGGCGGCGTCACCAGCAAATGGATCAATTGATAAGGTGAAGGTAACTGCTGATGAGGTTTCACGCAAGATTGAAGGTTTTCATATTGCAGATGATGGGAAATCCAAAGAGAAGGAAGAGGCGGGGGAGGAATGA 1056 0.4574 MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSENTHLLLTGGVEKILRIYDLNRHDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDIRTGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTVESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEAASPANGSIDKVKVTADEVSRKIEGFHIADDGKSKEKEEAGEE* 352
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2285 351 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Aev01g2285 351 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Aev01g2285 351 Pfam WD domain, G-beta repeat 263 297 IPR001680 GO:0005515
Aev01g2285 351 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 217 256 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 177 214 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 259 298 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 134 174 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 5 47 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 92 130 IPR001680 GO:0005515
Aev01g2285 351 SMART WD40_4 50 89 IPR001680 GO:0005515
Aev01g2285 351 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Aev01g2285 351 SUPERFAMILY WD40 repeat-like 4 301 IPR036322 GO:0005515
Aev01g2285 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Aev01g2285 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Aev01g2285 351 CDD WD40 14 298 - -
Aev01g2285 351 Gene3D - 9 318 IPR015943 GO:0005515
Aev01g2285 351 PANTHER OS02G0205400 PROTEIN 1 346 - -
Aev01g2285 351 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 346 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev01g2285 Aev-Chr1 27030136 27033450 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2285 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 30.189 1.45e-40 144
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2285 K13137 - gmx:100782712 661.759