Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2280 ATGGACCCAAACTACTCTAACATTACCAACGACCTTGATGATCCTCTTCTCCACAACATCATGCCTAATTCTTCACTACACCACCACCTCCTTCCTCATCACCTCACTTCCGATACCGCACACTACAATCACAATCACAGCCCTTACGATTTTGGTTCCTCTTGGATTCAAACTCTCCTAAACGATGCCGTTTCTTCTCCCTCTCCCTCTCCCTCTCACTCTCACCTCACCGACCTTCACCTACTTCAGCTACCCCTACCCCTACCGCCACCGCCGCTTGATCATCAACAAACGGCGGTCGTGGTCGAGCCGCAACACGAAGAGGAAGACTCCGCGATAAGGCTTGTTCATATGCTGATCTCATGCGCCGAATCCCTCCAAAGAGGCCACGTGGCACACGCCGCCTCCTTAATCGACGCCATGCAATCTCTGTTGCGACACGTCAGCACCGCCTCCGCCATAGGAAAAGTCGCCGCTCACTTCATCCATGCTCTCACTCGCCGAATCTTCGCTCCGCCGATGACGGACCTCAACGGCGCCGGAACCGGCGCCGTAGACGACGGCGGCGTTCTCTACCACCACTTCTACGAGGCATGTCCTTACCTCAAGTTCGCTCACTTCACCGCCAACCAGGCCATCCTCGAGGCCTTTAGCGGCCACAACTGCGTCCACGTCATCGATTTCCACCTCGCGCACGGCCTCCAATGGCCGCCGCTCATCCAGGCCCTCGCCCTGCGTCCCGGCGGTCCTCCTTCGCTCCGGATCACCGGCATTGGCCCTCCCTCGCCTGACCGCCGCGACGCCCTCCGCGAAACCGGACTCCGGCTCGCTGAGCTCGCGCGCTCCGTCAACGTCCGGTTTGCGTTCCGCGGAGTTGCGGCGTCGCGGCTAGAGGACGTGGAGCCGTGGATGCTGCAGGTGCGGCCAGAGGAAGCCGTTGCGGTGAACTCCGTCATGCAACTCCACCGCCTCCTCGGATCCGACCCGATCCATGGCGATTCGATCGGGATCGAATCGGTTCTCGGTTGGATCCGGAGACTAAACCCTAAGATCGTGACGGTAGTGGAGCAAGAAGCCAATCACAATCAAACCGGGTTCTTAGAGCGGTTCACGGAAGCGCTGCATTACTACTCAGCGGTTTTCGACTCGCTGGAGGCTTGTCCGGTCGAACCGGACAAGGCCTTAGCCGAAATGTATCTGGAAAGAGAGATCTGCAACGTGGTTTGCTGCGAGGGCCCAGCCCGGGTGGAGAGGCACGAACCGCTGGCCCAATGGAAGGCCCGGCTGGAGAAAGCCGGGTTTAAGTGCGTGGGTTTAGGGTCGAATGCGCTGAGGCAGGCGAGCATGTTGCTGAGTCTGTTTTCGGCTGAGGGTTACTGCGTGGAAGAGAAGGAAGGGTGTTTGACTTTGGGTTGGCATGGAAGGCCCCTCATTGCGGCTTCTGCTTGGCAACCCTTTCCTCACTCTCACTCTTAG 1476 0.5874 MDPNYSNITNDLDDPLLHNIMPNSSLHHHLLPHHLTSDTAHYNHNHSPYDFGSSWIQTLLNDAVSSPSPSPSHSHLTDLHLLQLPLPLPPPPLDHQQTAVVVEPQHEEEDSAIRLVHMLISCAESLQRGHVAHAASLIDAMQSLLRHVSTASAIGKVAAHFIHALTRRIFAPPMTDLNGAGTGAVDDGGVLYHHFYEACPYLKFAHFTANQAILEAFSGHNCVHVIDFHLAHGLQWPPLIQALALRPGGPPSLRITGIGPPSPDRRDALRETGLRLAELARSVNVRFAFRGVAASRLEDVEPWMLQVRPEEAVAVNSVMQLHRLLGSDPIHGDSIGIESVLGWIRRLNPKIVTVVEQEANHNQTGFLERFTEALHYYSAVFDSLEACPVEPDKALAEMYLEREICNVVCCEGPARVERHEPLAQWKARLEKAGFKCVGLGSNALRQASMLLSLFSAEGYCVEEKEGCLTLGWHGRPLIAASAWQPFPHSHS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2280 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 486 IPR005202 -
Aev01g2280 491 Pfam GRAS domain family 115 484 IPR005202 -
Aev01g2280 491 PANTHER OS05G0574900 PROTEIN 43 486 - -
Aev01g2280 491 ProSiteProfiles GRAS family profile. 106 484 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2280 Aev-Chr1 26991979 26993454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2280 107 484 GRAS Transcription Factor Family AT1G14920 53.264 3.83e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev01g2280 GRAS 1.5e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2280 K14494 - jre:109006296 580.096