Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2277 ATGGCATCACCATCGGAACTAAGCCTTGAATGCAAGCCACACAGCTACTCCATGCTGCTGAAATCCTTTGGAGAGCTGCATCATCAGAGTCAGAACCAGAACCAGAACCAGACATACAAGCTTGAAGAGTTCCTCTCTCGCCTTGAAGAAGAACGCCTCAAGATTGATGCATTCAAGCGTGAACTCCCTCTTTGCATGCAACTCCTCACCAACGCTATGGAGGCATCAAGGCAGCAGCTTCAGGCGTTCAGAGTGAACCAACAACAAGGTGGGACAGGAGCAATAAGGCCAGTGGTTCTTGAAGAATTCATACCAATAAAGCATTCAAACTGCTCCTCCGATCAGATCAGCTCATCATTATCTGATCATCACAAGGCACAAAACATGTCTGACAATAAGGCTAATTGGATGACATCTGCTCAACTCTGGAGCCAAACATCAGAAGCAGCAACCAAACAACCAACACTCACATCATCATCCCCAAAAGAATCTCATAATTCTCATCACCATCATGATATTGGCTTCAATGTAAGCCCCAAGCTAGTCCTTGAAAACAAACACAGGAATGGTGGCTTCCTTCCATTCTCAAAAGAAAGTAGAAGCCCCACCTCTAATTCATCGCTGAGGGGTCTCCCTGAGCTGGCACTTGCATCTCCTGAGAAAGAAATGATGATATTGGATAATGATAATAAGAAATGTGCAGGGGAAATTACAGAGAATACTATTAAAGGGCATAATAATAAGATGGAGAATTCTAGTGGCAATAATAATAACAATGATGGGGTTGGGGTTGATCAAGGAAAAGGCGCTAGTCCTGTTGCATCATCTCATGCACAAACAAGCACAGCCACAACAACCACTTCTACTAATACAACTCAGACTCATAGGAAAGCAAGAAGGTGCTGGTCACCGGATTTGCACCGTCGATTTGTCAATGCCCTTCAAATGCTTGGTGGATCTCAAGTGGCCACGCCAAAACAGATAAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTGAAAAGCCATCTGCAGAAATATAGGCTTCACACAAGAAGACCAAGCCCAAGCCCACAAGCAGGTGCACCGGCACCGCAGCTTGTGGTCCTAGGAGGAATCTGGGTCCCACCGGAGTACGCCACGGCGGCTGCAGCTGCTCCTGCCCTCTACGGGGCTCACCACCCTGCCCCGCCGCCACACTACTGTGCAGCCACCCCGGTGCCCCAAGAGTTCTACACCGCCGCGCCGCCGCAGCCTCTGCTTCCTCCACCGCCGCCGCCACACCACAACGGCTCCCTGCACCACCACCTGCACGTGTACAAGGCGACGGCAGGGCACGGGCAGAGCTCGCCGGAATCGGAGGTTGGAGGAGGAGGTGAGCGGTCGGAGAGCATAGAGGATGGGAAATCGGAGAGTAGCAGCTGGAAGGGAGAGAGCGAAGGAGAGAGGAAAGGGCTCAACGAAGAAAGCAATGGCAGTGACATCACTCTCAAATTCTAG 1506 0.5013 MASPSELSLECKPHSYSMLLKSFGELHHQSQNQNQNQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFRVNQQQGGTGAIRPVVLEEFIPIKHSNCSSDQISSSLSDHHKAQNMSDNKANWMTSAQLWSQTSEAATKQPTLTSSSPKESHNSHHHHDIGFNVSPKLVLENKHRNGGFLPFSKESRSPTSNSSLRGLPELALASPEKEMMILDNDNKKCAGEITENTIKGHNNKMENSSGNNNNNDGVGVDQGKGASPVASSHAQTSTATTTTSTNTTQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAGAPAPQLVVLGGIWVPPEYATAAAAAPALYGAHHPAPPPHYCAATPVPQEFYTAAPPQPLLPPPPPPHHNGSLHHHLHVYKATAGHGQSSPESEVGGGGERSESIEDGKSESSSWKGESEGERKGLNEESNGSDITLKF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2277 501 MobiDBLite consensus disorder prediction 461 491 - -
Aev01g2277 501 Coils Coil 41 61 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 272 297 - -
Aev01g2277 501 Pfam Myb-like DNA-binding domain 299 350 IPR001005 -
Aev01g2277 501 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 501 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 196 211 - -
Aev01g2277 501 SUPERFAMILY Homeodomain-like 294 355 IPR009057 -
Aev01g2277 501 MobiDBLite consensus disorder prediction 144 173 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 415 432 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 415 501 - -
Aev01g2277 501 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 501 IPR044787 GO:0003700|GO:0006355
Aev01g2277 501 MobiDBLite consensus disorder prediction 192 211 - -
Aev01g2277 501 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 297 352 IPR006447 GO:0003677
Aev01g2277 501 Gene3D - 296 354 - -
Aev01g2277 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 294 354 IPR017930 -
Aev01g2277 501 MobiDBLite consensus disorder prediction 242 301 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 144 162 - -
Aev01g2277 501 MobiDBLite consensus disorder prediction 242 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2277 Aev-Chr1 26962901 26965228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2277 1 501 G2-like Transcription Factor Family AT2G03500 44.213 1.48e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev01g2277 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2277 - - gmx:100797015 508.834