Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev01g2259 | ATGTCATCATCAAGTGGAATGATCATGAGTTGGAGCTATGAGGAAGAGAAAGCATTTGAGAATGCAATAGCCATGCATTGGATTGATGAAGAGTCAAAAGAGCAATGGGAGAAGATTGCTTCAGAAGTTCCAAGCAAAAGCATGGAAGAGTTGAAGCAACATTATAAGGTCCTTGTTGAGGATGTTAGTGCAATAGAGGCTGGTCATATACCATTTCCAAATTATGCTTCAGAGGAAACTACATCTTCAAACAAGGATTTCCATGGTTCTTCCAAGTCCACAAATTCAGATAAGAGATCGAATTGTAATTATGGAAGTGGGTTTTCTGGCTTAGGACATGACTCCAACACCACACAGAGTGGTAAAGGAAGTATGTCAAGGTTATTTTTACTTGGTCTAGACAAGTTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATTTCAAGGACTCCAACTCAAGTTGCAAGCCATGCACAGAAGTACTTCATTAGGTTGAACTCAATGAATAGGGATAGGAGGAGGTCAAGTATCCATGACATTACAAGTGTGAACAATGGAGATGTGGCCAGTAATCAGGCACCAATTACAGGACAGCATAGCACAATACCCTCAACAACAATGGCTATGGGAGTGCAATCAGTGAAGCATAGGGGTCAACCCCATCATCATCATATGCCTGCTGCTGGTATAGGCATGTATGGTGCACCAGTTGGCCATCCTGTGGCTGCTCCTCATGGCCATATGGCTTCCGCAGTTGGAACTCCGGTGATGCTTCCTCCCGGACCGCACCCGCATCATCCCCATCCGCATCCTCATCCTCATCCACATCCTCCTTATGTTGTACCTCTTGCTTACCCAATGGCACCTCCAACAATGCACCAATAA | 894 | 0.4418 | MSSSSGMIMSWSYEEEKAFENAIAMHWIDEESKEQWEKIASEVPSKSMEELKQHYKVLVEDVSAIEAGHIPFPNYASEETTSSNKDFHGSSKSTNSDKRSNCNYGSGFSGLGHDSNTTQSGKGSMSRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASNQAPITGQHSTIPSTTMAMGVQSVKHRGQPHHHHMPAAGIGMYGAPVGHPVAAPHGHMASAVGTPVMLPPGPHPHHPHPHPHPHPHPPYVVPLAYPMAPPTMHQ* | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev01g2259 | 297 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 127 | 167 | IPR006447 | GO:0003677 | |
Aev01g2259 | 297 | Gene3D | - | 126 | 171 | - | - | |
Aev01g2259 | 297 | SMART | sant | 121 | 167 | IPR001005 | - | |
Aev01g2259 | 297 | SMART | sant | 7 | 61 | IPR001005 | - | |
Aev01g2259 | 297 | MobiDBLite | consensus disorder prediction | 75 | 100 | - | - | |
Aev01g2259 | 297 | Gene3D | - | 2 | 72 | - | - | |
Aev01g2259 | 297 | SUPERFAMILY | Homeodomain-like | 10 | 65 | IPR009057 | - | |
Aev01g2259 | 297 | SUPERFAMILY | Homeodomain-like | 126 | 170 | IPR009057 | - | |
Aev01g2259 | 297 | MobiDBLite | consensus disorder prediction | 185 | 205 | - | - | |
Aev01g2259 | 297 | CDD | SANT | 127 | 165 | IPR001005 | - | |
Aev01g2259 | 297 | ProSiteProfiles | SANT domain profile. | 6 | 63 | IPR017884 | - | |
Aev01g2259 | 297 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 127 | 169 | IPR017930 | - | |
Aev01g2259 | 297 | MobiDBLite | consensus disorder prediction | 74 | 100 | - | - | |
Aev01g2259 | 297 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 9 | 296 | - | - | |
Aev01g2259 | 297 | CDD | SANT | 14 | 59 | IPR001005 | - | |
Aev01g2259 | 297 | PANTHER | TRANSCRIPTION FACTOR MYBS1 | 9 | 296 | - | - | |
Aev01g2259 | 297 | Pfam | Myb-like DNA-binding domain | 9 | 58 | IPR001005 | - | |
Aev01g2259 | 297 | ProSiteProfiles | Myb-like domain profile. | 10 | 59 | IPR001005 | - | |
Aev01g2259 | 297 | MobiDBLite | consensus disorder prediction | 261 | 280 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev01g2259 | Aev-Chr1 | 26776237 | 26777453 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Aev01g2259 | Myb_DNA-binding | 1.6e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev01g2259 | - | - | vun:114176836 | 447.203 |