Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2257 ATGTTTGTTTTTGTGTTTGGCGTGCGTTGGAGGCTAAAAAAGCAGAGAGTTCAGAAAGAAGAAGCAATGTATAATAGCACAGTGAAGAGAGAGAGAAAGGAAGGGACTTTCGAGGGGAAGATGAGCTGGCGCAGGGTGTTGAAGTCTGCGCAAGCACTCGCAGCACACATTTTTCTGCTATGCTTCACTGCTTTGCTTGTTCTCAAGCTCGATCACCGTCTATTTTCATCTTGGTGGACAATATTTTTCCCTCTTTGGATGTTTCATGCCGTTGTGGCCCGCGGAAGGTTTTCATTACCAGCGCCGTCAGCCCCGCGTAATCGAAATTGGGCACCATGTCATGCCGTCGTCGCAATGCCATTGCTTATTGCTTTTGAATTGCTCCTTTGTATATATCTTGAGAGCTTCTATGTTTATGGCCTTCCAGCAGTTAATCTGAAGATTGTGTTCCTTCCCTTACTAACCTTTGAAATCATTATTCTCATTGACAATTTCAGAATGTGTAGGGCTCTAATGCCAGGAGATGAAGAAAACATGAGTGACGAGGCAATATGGGAAACTCTTCCTCACTTTTGGGTTGCAATCTCTATGGTCTTCTTCATTGCTGCTACAGTTTTCACTCTCTTAAAATTGAGTGGTGATGTAGGTGCTCTGGGATGGTGGGACTTGTTTATTAACTTTGCCATCGCTGAGTGCTTTGCTTTCCTTGTATGTACAAAGTGGTCTAATCCTGTCATTCATCAAAACTCAAGAGAACCTAGTTCATCTTCTACTACAATTAGATATCTTGACTGGAACAGTGGTTTAGTAGTTTCCTCTGAGGAAAATCAACGTCAGGAGAGAATGTGTACCCTGCCAGATATAGGAGGTCATTTCATGAAAGTGCCAATTATTGTGTTCCAGATTCTTGTTTGTATGTACTTGGAGAGAACACCTGCTTGTGCTGCATATATACCTCTTCCAGTTCTTTTCTCTCCCATTTTCATACTTCAAGGTGCTGGTGTACTGTTAGCTTCGTCTAAGTTAGTGGAAAAACTTATTCTGCTACTAAACAATGGAGCCGGTGGAGGGGTATATTTTAGATGTACTTCAAGAGCTCATGATTGCTTGGGGTTCTTGCACCATGGTTCTAGGTTATTAGGCTGGTGGTCAATTGATGAAGGGAGTCGGGAAGAACAGGCACGGTTATACCATGAGGGGGAATCTGGGTACAATACGTTCTCCGGCTATCCACCCGAGATTGTTAAGAAAATGCCTAAAAAGGATCTCGCTGAGGAGGTTTGGAGACTCCAGGCCGCTCTTGGAGAGCAGACGGAAATTACAAAATACAGCCAGCAAGAGTATGAAAGACTTCAAAATGAGAAAGTTTTATGCAGAGTTTGTTTCGAGGGAGAGATCAGCGTCGTATTACTCCCGTGTCGGCATCGCATACTTTGCAGCAACTGCTCGGAGAAATGCAAGAAATGCCCGATCTGCCGTGATGCTATCGCGGAGCGCTTACCTGTGTATGATGTTTAG 1518 0.4394 MFVFVFGVRWRLKKQRVQKEEAMYNSTVKRERKEGTFEGKMSWRRVLKSAQALAAHIFLLCFTALLVLKLDHRLFSSWWTIFFPLWMFHAVVARGRFSLPAPSAPRNRNWAPCHAVVAMPLLIAFELLLCIYLESFYVYGLPAVNLKIVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDLFINFAIAECFAFLVCTKWSNPVIHQNSREPSSSSTTIRYLDWNSGLVVSSEENQRQERMCTLPDIGGHFMKVPIIVFQILVCMYLERTPACAAYIPLPVLFSPIFILQGAGVLLASSKLVEKLILLLNNGAGGGVYFRCTSRAHDCLGFLHHGSRLLGWWSIDEGSREEQARLYHEGESGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRILCSNCSEKCKKCPICRDAIAERLPVYDV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2257 505 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 41 505 - -
Aev01g2257 505 Pfam Transmembrane Fragile-X-F protein 68 330 IPR019396 -
Aev01g2257 505 Pfam Zinc finger, C3HC4 type (RING finger) 455 497 - -
Aev01g2257 505 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 41 505 - -
Aev01g2257 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 434 503 IPR013083 -
Aev01g2257 505 ProSiteProfiles Zinc finger RING-type profile. 458 493 IPR001841 -
Aev01g2257 505 SUPERFAMILY RING/U-box 449 499 - -
Aev01g2257 505 SMART ring_2 458 492 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2257 Aev-Chr1 26759455 26766093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2257 41 505 C3H Transcription Factor Family AT1G73950 72.043 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2257 - - gmx:100791390 850.121