Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2255 ATGTATCATCATCACCATCCTTCAAATAGTAATAGCTCATCCTTCAATGGCAATGACCTAGTAATCTCTTCCTCATCCAATTACTACCCTATCCATCAACAAATTTTCTCTAATAGGCCTTTTTCTTCTTCTTCATCCACTATTGAAAGCAACCCATCTAATAACAATAATTCTTCCAAAGATCATAATGAATTAGATCAAACCATAACCACCAATTGTTGTGATACTACTACTCTTCCTCTTCCTCTCCCTTTCTCCTTTCTTCAATTCCCTTATTCTCCCTTTGAAGACAATGATATTTTCCACCAAAACCATAATGATGAAGATGATGATGACTTCTTTCTTCACCACCACCACCAATCTCTAACACCACCACCACCTCCTCCTCCTCCTCATAATGAAACTACTGCTACTACTTCAGGTGTAGTAAACATGGAGGTTTCAATCACCACCACCACCACCAAAAAGGTAATTCCTCCAAAATCAACAGCACCAACAACAATTGCTCATCATCAGATCCCAATAATGAGGAGAAGATCTAGCAAGAGGGACAGACACAGCAAGATCAAGACGGCGAAAGGGCTAAGGGATCGGCGAATGAGGCTGTCCCTTGATGTTGCCAAGAGATTCTTCGGCCTTCAGGACATGCTAGGCTTTGACAAAGCAAGCAAGACCGTTGAGTGGCTGCTCAACCAAGCGAAAGGCGAGATCAAGCAACTCACAAGGGAGAAGAAGAAGAAGAATCACCCAAGCTATGATAACAAGAGTGCATCTTCAAGTTCTGAATGCATCGAGGGCGTGTCGAGTTTGGACGAGGTTGCTGTTAGTGGAAATCAAGAACAAGATCAGAAAGAAGTGGTGGCTATTATTCCAACCTCCTCAAAAGTGGGGATGAATAATAATAATAAGAAGAGATCAAGAAGTGGTGCAAACAACAACCATCATCATCATAACAGATTGGGATCATGGAACCCCTTTGAAAGTTGTACTGCTGTGGAGGAGAGTCAAATTAGTGTGAATCCTTCTTCTTTTGATGAGCTTATTGTTGAGGCTGAGGAAAGAAGCTCTCAAGCAAAGGATGATGATAGTAATAGTAATAATAATAATAATAATAATAATCAGAATCATCAAGATTTGGGCAATTGTTGTGCGGGTGTGGGTGATGATTGTTTTGTGATTATGAGCAGATGGAGCCCAACCATGATTCTCAATTCTCTCAACAACCCCGGAATCCTTCAAGAACATCAATTTGCAGAATTTCAGGCCATGGGAAAACCCTGCTGGGAGGCCTACAACAATCACATCTAA 1308 0.4113 MYHHHHPSNSNSSSFNGNDLVISSSSNYYPIHQQIFSNRPFSSSSSTIESNPSNNNNSSKDHNELDQTITTNCCDTTTLPLPLPFSFLQFPYSPFEDNDIFHQNHNDEDDDDFFLHHHHQSLTPPPPPPPPHNETTATTSGVVNMEVSITTTTTKKVIPPKSTAPTTIAHHQIPIMRRRSSKRDRHSKIKTAKGLRDRRMRLSLDVAKRFFGLQDMLGFDKASKTVEWLLNQAKGEIKQLTREKKKKNHPSYDNKSASSSSECIEGVSSLDEVAVSGNQEQDQKEVVAIIPTSSKVGMNNNNKKRSRSGANNNHHHHNRLGSWNPFESCTAVEESQISVNPSSFDELIVEAEERSSQAKDDDSNSNNNNNNNNQNHQDLGNCCAGVGDDCFVIMSRWSPTMILNSLNNPGILQEHQFAEFQAMGKPCWEAYNNHI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2255 435 MobiDBLite consensus disorder prediction 116 138 - -
Aev01g2255 435 PANTHER TRANSCRIPTION FACTOR TCP18 96 374 - -
Aev01g2255 435 MobiDBLite consensus disorder prediction 351 373 - -
Aev01g2255 435 MobiDBLite consensus disorder prediction 240 322 - -
Aev01g2255 435 ProSiteProfiles TCP domain profile. 182 240 IPR017887 -
Aev01g2255 435 MobiDBLite consensus disorder prediction 253 307 - -
Aev01g2255 435 Pfam TCP family transcription factor 181 311 IPR017887 -
Aev01g2255 435 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 96 374 IPR005333 GO:0003700
Aev01g2255 435 MobiDBLite consensus disorder prediction 40 64 - -
Aev01g2255 435 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2255 Aev-Chr1 26734261 26736030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2255 168 240 TCP Transcription Factor Family AT3G18550 72.000 1.35e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev01g2255 TCP 4.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2255 - - adu:107471910 240.736