Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2240 ATGGCTGATTCAGACACAGAACACAAGCTTCAATCTTCTCCTATGGATGAAATCACGAAGGCGAAGAAGAAGATGAAGAAGAAGAAGCACGACAAAAAAAGACCTCGAGATTCCGAAACAGAGGAGCAACCACCTGAACCTCAACTAGACGATGCAGAAGCAGAACCCATCGAAAACACGAATGAGACTAAGAAGAAGAAGAAAAAAGTGAAGAGATTCGAAAAAGTAGAAGAAGAAGAAACCGAAGTTGTTGACAAGGGTGAAAACGACGAGGAAGAAGAAGAAGAAGAAGAGAAAGTGGCGAAGAAGAAGAAGAAAGGTAGTGGTTCAGGAATTATGAGCAACGAGTCGTTTTCTTCTCTAGGGTTATCGGAGCCAACTTCCAAGGCCATTGCGGACATGGGGTTCGAGCACATGACCCAGATTCAAGCGAGGGCCATTCCACCACTTCTCATTGGCAAAGATGTTCTCGGTGCCGCAAGGACAGGTTCTGGAAAAACCCTAGCATTCTTAATCCCTGCGGTGGAGCTCCTTTACAATGTTCAATTCACCCCTCGTAATGGTACTGGTGTTGTTGTCATTTGCCCCACCAGAGAGCTTGCAATTCAGACACATGCTGTGGCCAAGGAGCTTCTGAAGTATCATTCACAGACACTTGGATTGGTTATTGGAGGTGCGACTAGGAAACTTGAAGCTGAACGTATTGCTAAAGGGGTGAATCTAGTGGTGGCAACACCTGGTCGTCTTCTAGATCATCTTCAGAATACTAAGGGATTCATTTATAAGAACTTGAAGTGCCTCATGATTGATGAAGCGGATAGGATATTGGAAGCTAACTTTGAGGAGGAAATGAAGCAGATCATTAAGATCCTTCCAAAGACTAGGCAAACAGCTTTATTTTCAGCTACACAAACGAAGAAGGTTGAGGATCTTGCTCGCTTATCATTTCAGACACCTCCTGTTTATATTGATGTAGATGATGGGAGAACCAAGGTCACAAATGAAGGCTTGCTGCAGGGTTATGTTGTTGTTCCCTGTGCCAAGCGATTTATTGTTCTATATTCTTTCTTGAAGAGACATCAGTCAAAAAAAGTGATGGTCTTTTTCTCTTCATGTAACTCTGTCAAATTCCACGCTGACATTCTTAATCTCATCCATTTGAATTGCTCAAGTATTCATGGAAAACAAAAGCAGCAGACCCGCACAACTACATTCTTTGACTTCTGCAAAGCAGAAAAGGGGATTTTGCTCTGTACTGATGTTGCTGCTCGCGGACTTGACATACCTCTTGTGGACTGGATTGTGCAGTATGATCCACCAGATGAACCAAAGGAATACATCCATAGGGTTGGTAGAACTGCTCGTGGGGAAGGTGGAAAGGGAAATGCTCTGCTTTTCTTGATTCCTGAAGAATTACAATTTCTTCGCTATCTGAAGGCAGCTAAAGTCCCTGTTAAAGAGTATGCATATGATGAAAAGAAGGTGGCGAATGTACAGTCTCATCTGGAGAATTTGGTAGTCAACAATTTCTATTTGAATAAGATGGCTAAAGAAGCTTATAGATCATATATATTAGCGTACAATTCACATTCTATGAAGGATATATTCAATGTTCAACGCCTGGATTTGCAGGCTGTTGCTGCTTCTTTCTGCTTCTCAAACCCACCAAATGTGACTCTGAACATAAACAGCAGCAAGCAGAGGAAGAAAATGCGCAAGGTTGATGGAAGTAGGCATGGATTCAGCGACAGCAATCCTTATGGAAAGAGAAGTGCCGATGATAACCGGCAATTCGCAAGGCATTAG 1806 0.4275 MADSDTEHKLQSSPMDEITKAKKKMKKKKHDKKRPRDSETEEQPPEPQLDDAEAEPIENTNETKKKKKKVKRFEKVEEEETEVVDKGENDEEEEEEEEKVAKKKKKGSGSGIMSNESFSSLGLSEPTSKAIADMGFEHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYNVQFTPRNGTGVVVICPTRELAIQTHAVAKELLKYHSQTLGLVIGGATRKLEAERIAKGVNLVVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKTRQTALFSATQTKKVEDLARLSFQTPPVYIDVDDGRTKVTNEGLLQGYVVVPCAKRFIVLYSFLKRHQSKKVMVFFSSCNSVKFHADILNLIHLNCSSIHGKQKQQTRTTTFFDFCKAEKGILLCTDVAARGLDIPLVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANVQSHLENLVVNNFYLNKMAKEAYRSYILAYNSHSMKDIFNVQRLDLQAVAASFCFSNPPNVTLNINSSKQRKKMRKVDGSRHGFSDSNPYGKRSADDNRQFARH* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2240 601 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 116 144 IPR014014 GO:0003724
Aev01g2240 601 Pfam Helicase conserved C-terminal domain 352 456 IPR001650 -
Aev01g2240 601 SMART helicmild6 376 457 IPR001650 -
Aev01g2240 601 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 349 496 IPR001650 -
Aev01g2240 601 Coils Coil 84 104 - -
Aev01g2240 601 CDD DEADc_DDX18 127 324 IPR044773 GO:0003724|GO:0005524
Aev01g2240 601 MobiDBLite consensus disorder prediction 565 601 - -
Aev01g2240 601 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 268 276 IPR000629 -
Aev01g2240 601 SMART DUF4217_3 497 560 IPR025313 -
Aev01g2240 601 Pfam DEAD/DEAH box helicase 140 311 IPR011545 GO:0003676|GO:0005524
Aev01g2240 601 SMART ultradead3 135 340 IPR014001 -
Aev01g2240 601 Gene3D - 337 577 IPR027417 -
Aev01g2240 601 Pfam Domain of unknown function (DUF4217) 498 558 IPR025313 -
Aev01g2240 601 MobiDBLite consensus disorder prediction 1 21 - -
Aev01g2240 601 CDD SF2_C_DEAD 337 467 - -
Aev01g2240 601 PANTHER RNA HELICASE 50 591 - -
Aev01g2240 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 323 IPR027417 -
Aev01g2240 601 MobiDBLite consensus disorder prediction 1 123 - -
Aev01g2240 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 262 471 IPR027417 -
Aev01g2240 601 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 147 322 IPR014001 -
Aev01g2240 601 Gene3D - 57 326 IPR027417 -
Aev01g2240 601 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 51 50 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2240 Aev-Chr1 26623565 26627466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2240 115 475 Eukaryotic Initiation Factors Gene Family AT3G13920 32.055 5.35e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2240 K13179 - gmx:100797375 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2240 01 26623565 26627466 Aev01g2240 01 26623565 26627466 ECH