Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2237 ATGGAGCCCATGGATATCGTTGGCAAATCGAAGGAAGATGCTTCGCTTCCTAAAGCGACAATGACAAAAATTATTAAAGAGATGTTACCCCCTGATGTACGTGTCGCTAGAGATGCTCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATAAACCTCGTTTCATCAGAGTCCAATGAAGTCTGTAACAGGGAGGAAAAACGGACTATTGCACCCGAGCATGTACTGAAGGCTTTAGAGGTTCTTGGATTTGGTGAATATATTGAAGAAGTGTATGCAGCATACGAACAGCACAAGCTGGAGACAATGCAGGACTCGTTAAAAGCTGGTGGCAAGTGGAGCAATGGTGCTGAGATGACCGAAGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCCCGCGCCAGGATGAACGGCGGGGCTATTCCTTCGAAGCAGCCAGAAGCTGACCAAAGTTTAGATAGCTAA 474 0.4557 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKAGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIPSKQPEADQSLDS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2237 157 MobiDBLite consensus disorder prediction 138 157 - -
Aev01g2237 157 Gene3D Histone, subunit A 4 143 IPR009072 GO:0046982
Aev01g2237 157 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Aev01g2237 157 SUPERFAMILY Histone-fold 12 144 IPR009072 GO:0046982
Aev01g2237 157 PANTHER PROTEIN DR1 HOMOLOG 1 156 IPR044255 -
Aev01g2237 157 PANTHER PROTEIN DR1 HOMOLOG 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2237 Aev-Chr1 26607356 26609770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2237 1 153 CCAAT-DR1 Transcription Factor Family AT5G23090 84.516 2.26e-93 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev01g2237 CBFD_NFYB_HMF 3.5e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2237 K21751 - gmx:100807912 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2237 01 26607356 26609770 Aev01g2237 01 26607356 26609770 ECH