Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2233 ATGGAAAACCTAGGAAACTTTCCACACCAATCTCAACAGAGCCAAAACCAGAACAACCTTTCTGCAGTACCTCTTGAAATAGACAAGTCCTATAGTACTAATAGTACCATGATGAAGATGGTTCCAAAAACAGGAAAAAATAAGAAGAAGTTTCTTGGGGTTAGACAAAGGCCTTCAGGTAGATGGATTGCAGAGATCAAAGACTCATCACAGAAACTGAGGCTTTGGTTGGGAACTTTTGACAGAGCAGAGGAGGCTGCTCTGGCTTATGATTGTGCTGCAAGGATCCTCAGAGGAAGGAATGCAAAAACAAATTTCCCAATTTCCCAAAATAATAATAATAATAATGGAATCATCATGAACACTACTACTACTACTACTAATCATCATGAGGAAAAGTATTGCTGCAGCATTTTGGGGAAGAATCCAAGGGCTTATCAGCTACTTAAGCATGCACTAGTGATGAAGAACCGTTCTGCTTCTGCTTCTGCAGTTTCTTCTTCTTCATCATCATCTGTTTATTCCACTATGCCATGGAAAAACCAGATGATGATGATGAGAGATGATAATAGTAATGAATTTGACACAGTTGTTGAGGATACTATAGTTTGTTCCATGATCCCTGAAGAACAAGGTGGTGGGTGCAGTAGTAGTAGTGGAATTTCATTTGGGAGTTGTAAGGTTTATTCTTCTGTTTATGTTGCTCCTTCTTTCAGTGCTGCTTCTGATGCAGGAATTGAACCTCCTAATTAA 753 0.3918 MENLGNFPHQSQQSQNQNNLSAVPLEIDKSYSTNSTMMKMVPKTGKNKKKFLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRAEEAALAYDCAARILRGRNAKTNFPISQNNNNNNGIIMNTTTTTTNHHEEKYCCSILGKNPRAYQLLKHALVMKNRSASASAVSSSSSSSVYSTMPWKNQMMMMRDDNSNEFDTVVEDTIVCSMIPEEQGGGCSSSSGISFGSCKVYSSVYVAPSFSAASDAGIEPPN* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2233 250 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 CDD AP2 49 109 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 MobiDBLite consensus disorder prediction 1 21 - -
Aev01g2233 250 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE 7 243 - -
Aev01g2233 250 Gene3D AP2/ERF domain 49 109 IPR036955 GO:0003700|GO:0006355
Aev01g2233 250 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Aev01g2233 250 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 243 - -
Aev01g2233 250 SUPERFAMILY DNA-binding domain 50 109 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2233 Aev-Chr1 26561349 26562101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2233 43 106 AP2-EREBP Transcription Factor Family AT5G19790 68.750 2.00e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g2233 AP2 1.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2233 K09286 - gmx:100807374 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2233 01 26561349 26562101 Aev01g2233 01 26561349 26562101 ECH